Query= MSMg01no457_h08.b1 MSMg01no457_h08.b1 CHROMAT_FILE:
MSMg01no457_h08.b1 PHD_FILE: MSMg01no457_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:40 2005
(244 letters)
>mm_chr12_81498561_81499204
Length = 644
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Minus
Query: 2 ctcattttcccctttgagctaggatctgagtgtttaagtttggcttggcttaaatggatt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcattttcccctttgagctaggatctgagtgtttaagtttggcttggcttaaatggatt 385
Query: 62 tggttagtgttaggggtcagggagacatgaaagttggtacctcatggggtgtgtattaca 121
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggttggtgttaggggtcagggagacatgaaagttggtacctcatggggtgtgtattaca 325
Query: 122 tgggagtggtgccacctttggggtggcagttaagagtctgctcctgctgtgtccactgtc 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 tgggagtggtgccacctttggggtggcagttaagagtctgctcctgctgtgtccactgcc 265
Query: 182 tgcccctgttggagcgatgcctcaggtgacatgattgtaatttctgttttcacagagccc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgcccctgttggagcgatgcctcaggtgacatgattgtaatttctgttttcacagagccc 205
Query: 242 ttc 244
|||
Sbjct: 204 ttc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_h08.g1 MSMg01no457_h08.g1 CHROMAT_FILE:
MSMg01no457_h08.g1 PHD_FILE: MSMg01no457_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:40 2005
(249 letters)
>mm_chr12_81352703_81353346
Length = 644
Score = 439 bits (227), Expect = e-128
Identities = 242/249 (97%), Gaps = 5/249 (2%)
Strand = Plus / Plus
Query: 1 ttcaggtcattctaagaagagtgaccaccctacatctctgtcccctgctgctgtgaatgc 60
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcaggtcatccta-gaagagtgaccaccctacatctctgtcccctgctgctgtgaatgc 259
Query: 61 taatggaggcccctgactaagggtgtctgactgacaggctggcatgcaagggttcctcca 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taatg----cccctgactaagggtgtctgactgacaggctggcatgcaagggttcctcca 315
Query: 121 tcctggaacttttgggacacaatcctggagaagactctgatccatctcagtagacagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tcctggaacttttgggacacaatcctggagaagactctgatccatctcagtagacagcaa 375
Query: 181 gtcatagccctatgggaggcctatggtagccaaggaccaagcaggcagtttccaggggaa 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtcatagccctatgggaggcccatggtagccaaggaccaagcaggcagtttccaggggaa 435
Query: 241 cagcatcct 249
|||||||||
Sbjct: 436 cagcatcct 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 644
Length adjustment: 9
Effective length of query: 240
Effective length of database: 635
Effective search space: 152400
Effective search space used: 152400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
