Query= MSMg01no457_h23.b1 MSMg01no457_h23.b1 CHROMAT_FILE:
MSMg01no457_h23.b1 PHD_FILE: MSMg01no457_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:43 2005
(214 letters)
>mm_chr12_41265958_41266571
Length = 614
Score = 344 bits (178), Expect = 2e-99
Identities = 207/228 (90%), Gaps = 18/228 (7%)
Strand = Plus / Plus
Query: 5 gaattcaaaagtctctgcgtaatatatgatccattccttatggaggaattttttctgagt 64
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaagtcactgtgtaatatatgatccattccttatggaggaattttttctgagt 264
Query: 65 gcttcttttagttcacatgatgtgtgtgtgtgttttcattctgtatatctgctagtgtgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcttcttttagttcacatgatgtgtgtgtgtgttttcattctgtatatctgctagtgtgt 324
Query: 125 gtgtgtgtgtgtgtgtgtgtgtgtgt------------------acatgaatgtgtatat 166
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacatgaatgtgtatat 384
Query: 167 tgtatatatgtgttgagactgtaggtaaatgttggttgaccttcttga 214
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 tgtatatatgtgttgagactggaggtaaatgttggttgaccttcttga 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no457_h23.g1 MSMg01no457_h23.g1 CHROMAT_FILE:
MSMg01no457_h23.g1 PHD_FILE: MSMg01no457_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:43 2005
(369 letters)
>mm_chr12_41443467_41444235
Length = 769
Score = 629 bits (325), Expect = 0.0
Identities = 358/369 (97%)
Strand = Plus / Minus
Query: 1 atgcttaataaaaggcaacataaagaaatagggaatgtttaaaaaagaaaatggtaatta 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atgcttaataaaaggcaaaataaagaaatagggaatgtttaaaaaagaaaatggtaatta 510
Query: 61 gcaaaagcaaaaggaattatgggtttaagaattatcatttcacatctctactgtaactat 120
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 509 gcaaaagcaaaaggaattatgggtttaaaaatgatcatttcacatctctactgtaactat 450
Query: 121 ctatctgggtaaagtactgtcatttaatactcaacatgaggattattgatgaggaaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 449 ctatctgggtaaagtactgtcatttaatactcaacatgaggattattaatgaggaaatgg 390
Query: 181 ctgttcacagagtacaatgcagtgaacttaaagacacgcatgatacctacaacaccctct 240
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 389 ctgttcacagagtacaatgcagtgaaattgaagacacgcatgatacctacaacaccctct 330
Query: 241 taccaatggcatcctgtgtctgcaatgaataataagctaaagagtgtggaagggaagcag 300
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 329 taccaatggcatcccgtgtctgcaatgaataataggctaaagagtgtggaagggaagcag 270
Query: 301 tgaatcccctctgctgaggcaccttctgaaggatgtgtggctccatgtctttgcatgagc 360
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 269 tgaagcccctctgctgaggcaccttctgaaggatgtatggctccatgtctttgcatgagt 210
Query: 361 gttgtctaa 369
|||||||||
Sbjct: 209 gttgtctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
