Query= MSMg01no457_k13.b1 MSMg01no457_k13.b1 CHROMAT_FILE:
MSMg01no457_k13.b1 PHD_FILE: MSMg01no457_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:57 2005
(462 letters)
>mm_chr12_90163002_90163863
Length = 862
Score = 543 bits (281), Expect = e-159
Identities = 311/321 (96%)
Strand = Plus / Minus
Query: 1 aactgaatgcatgtgtagaaagcaatgaattctactacacaactatttttagcttctcat 60
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 321 aactgaatgcatgtgtagaaagcaatgaattctactagagaactatttttagcttctcat 262
Query: 61 gttgacatacaattcaaactgtacaatatatactttaagtttaatttaatatcattttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgacatacaattcaaactgtacaatatatactttaagtttaatttaatatcattttct 202
Query: 121 gtttgagaaagaatctcacactatgtagcacatgataggtttgaacttattatcccaccg 180
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 201 gtttgagaaagaatctcacactatgtagcccatgataggtttgaacttaagatcccaccg 142
Query: 181 cctcagctttcttggtgggattacagacatctataaccaacacctggcttcaacttttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 141 cctcagctttcttggtgggattacagacatctataaccaacacctggcttcaactttaag 82
Query: 241 tgtgtgttctcactgtatagccttgccggcctgtatttcaccacacagaccaggctggcc 300
||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||
Sbjct: 81 tgtgtgttctcactgtatagccttgcctgcctggaattcactacacagaccaggctggcc 22
Query: 301 tggaactcagaccaatcttcc 321
|||||||||||||||||||||
Sbjct: 21 tggaactcagaccaatcttcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_k13.g1 MSMg01no457_k13.g1 CHROMAT_FILE:
MSMg01no457_k13.g1 PHD_FILE: MSMg01no457_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:57 2005
(248 letters)
>mm_chr12_89969437_89970083
Length = 647
Score = 422 bits (218), Expect = e-122
Identities = 239/252 (94%), Gaps = 11/252 (4%)
Strand = Plus / Plus
Query: 1 tcatatcagttcccaatgtctgggcaaggctttaaggtcttcatcctgctcagccatcac 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tcatatcagttcccaatgtctgggcaaggctttaaggtcttcatcctggtcagccatcac 260
Query: 61 tggtctccaatttcctcaccgtagctatggcaagagacctgctgctgagcttagctttga 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtctccaatttcctcaccctagctatggcaagagacctgctgctgagcttagctttga 320
Query: 121 atgagtcttgattcagtttggagaaaagcagaaaatgggaccctgcatggtgtcacaga- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgagtcttgattcagtttggagaaaagcagaaaatgggaccctgcatggtgtcacagaa 380
Query: 180 ----tttttttgcccaggacttccctctttttccaaagagcaataatctatgcactcact 235
| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggt------gcccaggacttccctctttttccaaagagcaataatctatgcactcact 434
Query: 236 acaagctaatcc 247
||||||||||||
Sbjct: 435 acaagctaatcc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
