Query= MSMg01no458_i22.b1 MSMg01no458_i22.b1 CHROMAT_FILE:
MSMg01no458_i22.b1 PHD_FILE: MSMg01no458_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:11 2005
(513 letters)
>mm_chr12_72679019_72679930
Length = 912
Score = 922 bits (477), Expect = 0.0
Identities = 501/512 (97%), Gaps = 7/512 (1%)
Strand = Plus / Plus
Query: 5 gaattcagtaagaattgcg---cccccggggcagctctgtccccggtgggactgtctgat 61
|||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtaagaa--gcgtgtcccc--gggcagctctgtccccggtgggactgtctgat 260
Query: 62 gaagtgggctctgttaaccgctctgggggcttcataggctttgattactgctcacgaggt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagtgggctctgttaaccgctctgggggcttcataggctttgattactgctcacgaggt 320
Query: 122 ttgcatttcttcaaggagcttaatgaggtttttctagggggcaaaaatcataaatttcca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcatttcttcaaggagcttaatgaggtttttctagggggcaaaaatcataaatttcca 380
Query: 182 tgttttagtagctcgcttggtagaagcataaattgtacatctctctcacagcccatagga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttttagtagctcgcttggtagaagcataaattgtacatctctctcacagcccatagga 440
Query: 242 gagggtgcctcacttgcttcttctgtgaggtagtaagacaaatgtcatctggtccatcac 301
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggatgcctcacttgcttcttctgtgaggtagtaagacaaatgtcatctggtccatcac 500
Query: 302 gtctgaagaaatatagagaagagcatggttaccataaacattaattatcttttaaaggta 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gtctgaagaaatatagagaagagcatggttaccataaacattaattatcttttaaaggga 560
Query: 362 cctactcagtttaaacaaaaatatcaggtttgcaaaatgtgtaatgtgtcttttgcagca 421
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catactcagtttaaacaaaaatatcaggtttgcaaaatgtgtaatgtgtcttttgcagca 620
Query: 422 gtaggagccaatgcccaatgtcaactgaatgtttttatagccttaaaatatctgcattca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaggagccaatgcccaatgtcaactgaatgtttttatagccttaaaatatctgcattca 680
Query: 482 ttttcttttatatggncataattatagagcaa 513
||||||||||||||| ||||||||||||||||
Sbjct: 681 ttttcttttatatggtcataattatagagcaa 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_i22.g1 MSMg01no458_i22.g1 CHROMAT_FILE:
MSMg01no458_i22.g1 PHD_FILE: MSMg01no458_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:12 2005
(592 letters)
>mm_chr12_72840446_72841437
Length = 992
Score = 572 bits (296), Expect = e-167
Identities = 305/308 (99%)
Strand = Plus / Minus
Query: 285 agtgtatttcccatctgttgcttgcagcaagtgagaaggtagtgttcagagatattcagg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agtgtatttcccatctgttgcttgcagcaagtgagaaggtagtgttcagagatattcagg 673
Query: 345 aagaaaaatggctgaatgagggtgagcagggaattacagagccttgtggatcaaaggcaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aagaaaaatggctgaatgagggtgagcagggaattacagagccttgtggatcaaaggcaa 613
Query: 405 gagaaacttgacttatcagtagagtcctcattcattgctggcactaatcctataagaatc 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gagaaacttgacttatcagtagagtcctcattcattgctggcactaatcctataagaatc 553
Query: 465 tcgcaagcagtgcctctgttgagagcaggttctgttgtttcctctgtgcagtgtcctcct 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcgcaagcagtgcctctgttgagagcaggttctgttgtttcctctgtgcagtgtcctcct 493
Query: 525 ccccacatttctaatgggcctgcttttacatgttactatggcttgtttccttgaagcttt 584
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 492 ccccacatttctaatgagcctgcttttacatgttactatggcttttttccttgaagtttt 433
Query: 585 taatattg 592
||||||||
Sbjct: 432 taatattg 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
