Query= MSMg01no458_p14.b1 MSMg01no458_p14.b1 CHROMAT_FILE:
MSMg01no458_p14.b1 PHD_FILE: MSMg01no458_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:42 2005
(578 letters)
>mm_chr12_6980788_6981765
Length = 978
Score = 1094 bits (566), Expect = 0.0
Identities = 575/578 (99%)
Strand = Plus / Plus
Query: 1 cgttagcaacgtgtagtttgggaatagtccagccattgaactgcttagggcatattacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgttagcaacgtgtagtttgggaatagtccagccattgaactgcttagggcatattacat 260
Query: 61 ttgtgtgtgtgcatgtgtgtcacctgccaggaagtttagagtagattaacttattacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgtgtgtgcatgtgtgtcacctgccaggaagtttagagtagattaacttattacagc 320
Query: 121 ctcaatctttacccatatctatgtctttcctttcctctagtaaaactctgagtctctatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaatctttacccatatctatgtctttcctttcctctagtaaaactctgagtctctatc 380
Query: 181 cttgctcactttcctctagttctaataaaaatctcattaatttacaatgacctttattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgctcactttcctctagttctaataaaaatctcattaatttacaatgacctttattcc 440
Query: 241 ctctattgtttagtgtcaaccctgggctttgactagaaagcagatggatgctacgaacaa 300
||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctaatgatgagtgtcaaccctgggctttgactagaaagcagatggatgctacgaacaa 500
Query: 301 ggattttcattcaggaagacataatttctcaattgcattaaaacaaacaagcaaaaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggattttcattcaggaagacataatttctcaattgcattaaaacaaacaagcaaaaagaa 560
Query: 361 aacctataagagataacaatctatcctgatgtaatttatttccttatttttgccaaatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacctataagagataacaatctatcctgatgtaatttatttccttatttttgccaaatgc 620
Query: 421 agtaggctcaacattggaagagaatgctatttgtcccctagattttttctttgtgccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtaggctcaacattggaagagaatgctatttgtcccctagattttttctttgtgccact 680
Query: 481 ctgtcagcttgtatctcgttgagatttgatggtgacctcacagataccttatcaatgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtcagcttgtatctcgttgagatttgatggtgacctcacagataccttatcaatgatg 740
Query: 541 acccagaggggctcagcagagcttggactttgggtaat 578
||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acccagaggggctcagcagagcttggactttgggtaat 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_p14.g1 MSMg01no458_p14.g1 CHROMAT_FILE:
MSMg01no458_p14.g1 PHD_FILE: MSMg01no458_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:42 2005
(322 letters)
>mm_chr12_7147205_7147927
Length = 723
Score = 598 bits (309), Expect = e-175
Identities = 319/323 (98%), Gaps = 3/323 (0%)
Strand = Plus / Minus
Query: 1 gagggcagcagaggatgtagatttgggtaggtggacggctggagaggaatcagagaggaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 707 gagggcagcagaggatgtagatttgggtaggtggatggctggagaggaatc--agaggaa 650
Query: 61 ataccataatcataatcagaatatattgtatatcaaaaatctattttcaatttaatataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ataccataatcataatcagaatatattgtatatcaaaaatctattttcaatttaatataa 590
Query: 121 aaatagattaaaccattgaagtattctaaaaataatagaaataaaagaaaaattaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaatagattaaaccattgaagtattctaaaaataatagaaataaaagaaaaattaaaaaa 530
Query: 181 taattagcataatattgggttcttgtatttggggatctaatttattttagtccataagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 taattagcataatattgggttcttgtatttggggatctaatttattttagtccataagcc 470
Query: 241 ctagtgatgaaagaattaaataataaaaaatgaaagaaaacaa-ttttttttaaacatat 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 469 ctagtgatgaaagaattaaataataaaaaatgaaagaaaacaagttttttttaaacatat 410
Query: 300 gcccgtacacaccctatgttcat 322
|||||||||||||||||||||||
Sbjct: 409 gcccgtacacaccctatgttcat 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
