Query= MSMg01no459_a22.b1 MSMg01no459_a22.b1 CHROMAT_FILE:
MSMg01no459_a22.b1 PHD_FILE: MSMg01no459_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:49 2005
(174 letters)
>mm_chr12_84009784_84010356
Length = 573
Score = 306 bits (158), Expect = 6e-88
Identities = 167/170 (98%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 5 gaattccagccctatgccactggctctttatgtgtgacagtacatatgtcccagtacagt 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagccc-aagccactggctctttatgtgtgacagtacatatgtcccagtacagt 263
Query: 65 gtaagctcatgagggttgaaaacatttgagtgtcctgatggtgtatggtttctgttgctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtaagctcatgagggttgaaaacatttgagtgtcctgatggtgtatggtttctgttgctt 323
Query: 125 tttatcagtattattgttattattgtgtaggttagtgtatatggaggtca 174
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttaccagtattattgttattattgtgtaggttagtgtatatggaggtca 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 573
Length adjustment: 8
Effective length of query: 166
Effective length of database: 565
Effective search space: 93790
Effective search space used: 93790
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no459_a22.g1 MSMg01no459_a22.g1 CHROMAT_FILE:
MSMg01no459_a22.g1 PHD_FILE: MSMg01no459_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:49 2005
(359 letters)
>mm_chr12_84166238_84166990
Length = 753
Score = 607 bits (314), Expect = e-178
Identities = 348/368 (94%), Gaps = 17/368 (4%)
Strand = Plus / Minus
Query: 1 tctgtccctgcatgtatgacttggtaggaaaggatgcagccacctggttgctaattc-cc 59
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 475 tctgtccctgcatgtgtgacttggtaggaagggatgcagccacctggttgctaattctcc 416
Query: 60 ttcccaaacatggaagtttaaacagcaggcaaaacatctgtaaaacgctccagttacttg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttcccaaacatggaagtttaaacagcaggcaaaacatctgtaaaacgctccagttacttg 356
Query: 120 ttttaaaagtcacttaaaccacctggatttctaaagacagtgtggtggccctagcctggg 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 355 ttttaaaagtcacttaaacca-------ttctaaagacagtgtggtggccctagcctggg 303
Query: 180 acaagaccctaaagattaatatcaatggcctcagttgggaaaagcaaaaactgcagaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acaagaccctaaagattaatatcaatggcctcagttgggaaaagcaaaaactgcagaagg 243
Query: 240 gaaattatggatgacaaagccagatcctgtgtgttctgatca--------ccccaccccc 291
|||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 242 gaaattatggatgacaaagccagatcctgtgtgttctgatcaggagtctccccccccccc 183
Query: 292 cc-aaagcgtgtatcgctccatcataaaagtaaaattcacctcagattaattgccgtgtg 350
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccaaaagcgtgtatcgctccatcataaaagtaaaattcacctcagattaattgccgtgtg 123
Query: 351 acttgtgg 358
||||||||
Sbjct: 122 acttgtgg 115
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 753
Length adjustment: 9
Effective length of query: 350
Effective length of database: 744
Effective search space: 260400
Effective search space used: 260400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
