Query= MSMg01no459_p20.b1 MSMg01no459_p20.b1 CHROMAT_FILE:
MSMg01no459_p20.b1 PHD_FILE: MSMg01no459_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:06 2005
(471 letters)
>mm_chr12_98427614_98428484
Length = 871
Score = 746 bits (386), Expect = 0.0
Identities = 396/400 (99%), Gaps = 2/400 (0%)
Strand = Plus / Minus
Query: 72 tagatgctgacaattttgcaactcctagagaaaaacggttttaaaagatcatgcgctggg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tagatgctgacaattttgcaactcctagagaaaaacggttttaaaagatcatgcgctggg 812
Query: 132 cgtggtggtgcacgcctttaatcacagcacttgggaggcagaggcaggcagatttctgag 191
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 811 cgtggtggtgcacgcctttaatcccagcacttgggaggcagaggcaggcagatttctgag 752
Query: 192 ttcgaggccagcctggtctacaaagtgagttccaggacagccagtgctatacagagaaac 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttcgaggccagcctggtctacaaagtgagttccaggacagccagtgctatacagagaaac 692
Query: 252 cctgtctcgaaaaaaaaaaaatattcaagctagactttgatatgcttaaaattcacttat 311
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cctgtctcgaaaaaaaaaaa--attcaagctagactttgatatgcttaaaattcacttat 634
Query: 312 cactttacttatttgtaaagaaagaaattatacttactcacttttgtataccgtgtacag 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 633 cactttacttatttgtaaagaaagaaattatacttactcacttttgtataccgtgtatag 574
Query: 372 acaatattacatgaaaagcagtatgcacatagataatgaattcaagatttcctggaagga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 acaatattacatgaaaagcagtatgcacatagataatgaattcaagatttcctggaagga 514
Query: 432 tttgatgctcagataacaaccggactcataaactaataat 471
||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttgatgctcagataacaaccggactcataaactaataat 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_p20.g1 MSMg01no459_p20.g1 CHROMAT_FILE:
MSMg01no459_p20.g1 PHD_FILE: MSMg01no459_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:07 2005
(326 letters)
>mm_chr12_98265148_98265874
Length = 727
Score = 559 bits (289), Expect = e-164
Identities = 310/317 (97%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 11 gaattccacacctctaagccccttaccccataaaaatccctagctttcgagcctcatggc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 211 gaattccacacctctaagccccttaccccataaaaatccctagctttcgagcctcgtggc 270
Query: 71 caacatccgttatctcctgtgtgggatacatgtagatctggagctccttcattaaactgc 130
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cgacatccattatctcctgtgtgggatacatgtagatctggagctccttcattaaactgc 330
Query: 131 gtcatgtgattacagcaatggattatcatgtttcttagggtgctctctcactcccgagac 190
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 331 ctcatgtgattacagcaatggattatcgtgtttcttagggtgctctctcactcccgagac 390
Query: 191 tagagtggggggtccctgaaagggggtcttacatgtatagggtaaaaaagagataaataa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tagagtggggggtccctgaaagggggtcttacatgtatagggtaaaaaagagataaataa 450
Query: 251 gatatttttatagtccaaacataacataatgaggcaaaaataactccaaagattttgttg 310
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gatatttttaaagtccaaacataacataatgaggcaaaaataactccaaagattttgttg 510
Query: 311 aaggttttttt-ctgtt 326
||||||||||| |||||
Sbjct: 511 aaggttttttttctgtt 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 727
Length adjustment: 9
Effective length of query: 317
Effective length of database: 718
Effective search space: 227606
Effective search space used: 227606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
