Query= MSMg01no460_g14.b1 MSMg01no460_g14.b1 CHROMAT_FILE:
MSMg01no460_g14.b1 PHD_FILE: MSMg01no460_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:39 2005
(518 letters)
>mm_chr12_101088244_101089161
Length = 918
Score = 801 bits (414), Expect = 0.0
Identities = 438/446 (98%), Gaps = 3/446 (0%)
Strand = Plus / Minus
Query: 1 tctgattcatgttctatacgtttgcttctaagaatcgcaaaaaccatgtttccaattacc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tctgactcatgttctatacgtttgcttctaagaatcgcaaaaaccatgtttccaattacc 398
Query: 61 ttttatgtttagcagttggaacattgtacttgaataaaattatataatgagtcaatgcta 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttttatgttcagcagttggaacattgtacttgaataaaattatataatgagtcaatgcta 338
Query: 121 aaatttcttagtcaactttcttttctatgaaattctggtttgtttatgttgaaagtcctt 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aaatttcttagtcaacttttttttctatgaaattctggtttgtttatgttgaaagtcctt 278
Query: 181 tttaaag-ttttttttttgatattaaattatttgtaggcatgtgcgtttgtgtgagggct 239
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 277 tttaaagtttttttttt-gatattaaattatttgtaggcatgtgcgtttgtgtgagggtt 219
Query: 240 tgtgcatgtaagtgtagttgcctatggaggccaaaagaggacattagattccctggaaca 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 218 tgtgcatgtaagtgtagttgcctatggaggccaaaagagggcattagattccctggaaca 159
Query: 300 ggagttagagttgtgaaatcgtctcaccatgctttctagtatgtttcctgtaatgtctgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ggagttagagttgtgaaatcgtctcaccatgctttctagtatgtttcctgtaatgtctgt 99
Query: 360 ctccatgtgtgacctggccatgtgtgacctggccatgtgtgacctggccatgtgtgacct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ctccatgtgtgacctggccatgtgtgacctggccatgtgtgacctggccatgtgtgacct 39
Query: 420 ggccatgtgtgacctggccat-tgtg 444
||||||||||||||||||||| ||||
Sbjct: 38 ggccatgtgtgacctggccatgtgtg 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_g14.g1 MSMg01no460_g14.g1 CHROMAT_FILE:
MSMg01no460_g14.g1 PHD_FILE: MSMg01no460_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:39 2005
(516 letters)
>mm_chr12_100940935_100941850
Length = 916
Score = 967 bits (500), Expect = 0.0
Identities = 512/516 (99%)
Strand = Plus / Plus
Query: 1 aatagaatttaatatcggagattttatttttagagaggcaaacatgtatctctagggtta 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 aatagaatttaatatcggagattttatttttagagaggcaagcatgtatctctagggtta 260
Query: 61 agagaagatcatccttggagctataaatccaaccctgttacagtcggaagagaatccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagaagatcatccttggagctataaatccaaccctgttacagtcggaagagaatccaca 320
Query: 121 agcatgagaaatgtcctcattgaagtaatagcatgcttcatttcaggctggaaaacgtcc 180
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 321 agcatgagaaatgtcctcattgaagtaatagcgtgcttcatttcaggttggaaaacgtcc 380
Query: 181 ttgctggtttctgtgggctcaatgacatagtgtgaggccccgcagacttgccacccagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctggtttctgtgggctcaatgacatagtgtgaggccccgcagacttgccacccagag 440
Query: 241 aggccggaagacatgggaggctttctgttgaagccttctgaggactcctatttctgagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggccggaagacatgggaggctttctgttgaagccttctgaggactcctatttctgagga 500
Query: 301 actcattattcatttaattattcattctgtttatttactgtatagttattacacataaat 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 actcattattcatttaattattcattctgcttatttactgtatagttattacacataaat 560
Query: 361 atggtgtaactccccagaatcctcaaacaccagatgccagcttccctctgcattccccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggtgtaactccccagaatcctcaaacaccagatgccagcttccctctgcattccccaa 620
Query: 421 agacagagcagagccatcgcagggagaattcaaacagctaaaacccaattaaagctgcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agacagagcagagccatcgcagggagaattcaaacagctaaaacccaattaaagctgcgg 680
Query: 481 cagcatgttcatttccaaaagaaaagccctgaaacc 516
||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagcatgttcatttccaaaagaaaagccctgaaacc 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
