GTTAGGTGACGTGCGNNGTGGTTATCTCTCCCCAACGACACCAGAGGGAT
AATATTTATCTTCGGGCTGCGGGAGGCATTGAGTGGGCAACCCCCACTCC
CCATTGCGATGCCCGGTCCCCCCTCTGTGCTAGGGGGGCCCCTAACAAAA
CACCAAAAACACGCCCCGTTCCTTTCTATTTCTCCCTAATCCTAATCTCT
ATACCATAGAGAATGATCTAATAGCCTTTGAGGTTGAGGAGGGTGGTACG
TGGCTGATTCGGGGAGGGTTGGGCCGTGCCATTGGCGCGGGGCGGGCGGC
CGGGCGGTTGGCGGGGGGGCCGGGTGGCCTTGCTGCGTGGCCCCGACCGG
CGGGGCCCGGGGGTGAAGAGTGCAAAAGGTCCCGGCGGCCTCGTGAGGGA
GATGGGGAGGTAGGCCGGGAGGGAGGAATATTTACTGCTAGCCTCAAGAG
AGGCTATGGGAGTCGGTCGGTGGCGTGCGGAACCTTAACGTAAAGTGGGA
CCCCGGGCCCCCTGGTCGGAATATAACCCCCTCAGGGATCTGGCCGGCGC
TGGTTCCATATTCCAGCACACCCGAGAGTTGAGTACTACACTTCCCCACC
ATCGGCGTTATTATTCGGGCCAGTGATCACCAATTACTGCTTACGTTACC
TACTCAGACGAACCTATAGGTGCCATCACGAACCACGATTAGCTGACCCG
TTCGCAGCACAGCATTGTTCATTGCCAGCTACTCTGATTGGCGCCTGACG
GCCATATACAGCCGCGAAGCGGGGGGCAGGCGAGCAGAGTTATGCGTCAG
TGAATTCTTACGTGCACTTTTCACGCGGGCGATTTGCGTTGACGTCATGC
ATCTCGGCCACACACACTTAACTTAN

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCATATAAACTAATTTCCTAGACAGAAAAAATA
TTTTATGTATTTAATTTAGAACACATAGTGCTATTTGTATTTATGAGTAA
AAATTAAGTAGCAATGTTGATCCCTCATGAAACACAGCACGCTGACTGTT
GGTTGGAGTGGGCCCTGTAATTTAAAAAGTGCTATATTTCAAATTATTTG
TTTTTGTTTCATGAGCATTTTTTAAAAATAAACAAATAATGTTTCAAATT
CCATTCACATTTTTTGTCTGTATGAAATTGTCCCTATGTCACAGAAATGG
TGTATAATGCTTCCTATATAACCATTCTTGGAAATGCCATAGGTTTCATA
GTTCAGTTAAGGTTTTTTTCCTCTGTTCTTTGATTTTTTATTTTTTTAAA
TTTTTAATTAATTAGTTAGTTAATTAATGTTGAGGCAGGTCTTACCATCT
AGTACAGGCTGGCAACAGCACACCTCCTGCCTTCCGGCCCAAGCCTTCCA
AAGTGGTGCTGTTGCTAAAATATGTCTGTGAGACCTGCCTGTCTTTCGCA
ATTTTCATATTTTGGTAAATACATGTGTTTTATTAATCCTCCAAAAAACC
TTGTTTATTTGGTTGTCTTATGTCCTCATGTCTTGAAGTTTGAAAATCCC
ATGAACCTTTTATAACTGCTTTACACTCC

Query= MSMg01no460_l16.g1 MSMg01no460_l16.g1 CHROMAT_FILE:
MSMg01no460_l16.g1 PHD_FILE: MSMg01no460_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:04 2005
         (470 letters)



>mm_chr12_42904418_42905288
          Length = 871

 Score =  849 bits (439), Expect = 0.0
 Identities = 463/471 (98%), Gaps = 2/471 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catataaactaatttcctagacag-aaaaaatattttatgtatttaatttagaacacata 59
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 catataaactaattttctagacagaaaaaaatattttatgtatttaatttagaacacata 506

                                                                       
Query: 60  gtgctatttgtatttatgagtaaaaattaagtagcaatgttgatccctcatgaaacacag 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 505 gtgctatttgtatttatgagtaaaaattaagtagcaatgttgatccctcatgaaacacaa 446

                                                                       
Query: 120 cacgctgactgttggttggagtgggccctgtaatttaaaaagtgctatatttcaaattat 179
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacgctgactgttggttggactgggccctgtaatttaaaaagtgctatatttcaaattat 386

                                                                       
Query: 180 ttgtttttgtttcatgagcattttttaaaaataaacaaataatgtttcaaattccattca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtttttgtttcatgagcattttttaaaaataaacaaataatgtttcaaattccattca 326

                                                                       
Query: 240 cattttttgtctgtatgaaattgtccctatgtcacagaaatggtgtataatgcttcctat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattttttgtctgtatgaaattgtccctatgtcacagaaatggtgtataatgcttcctat 266

                                                                       
Query: 300 ataaccattcttggaaatgccataggtttcatagttcagttaaggtttttttcctctgtt 359
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaccattcttggaaaagccataggtttcatagttcagttaaggtttttttcctctgtt 206

                                                                       
Query: 360 ctttgattttttatttttttaaatttttaattaattagttagttaattaatgttgaggca 419
           |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctttgactttttatttttttaa-tttttaattaattagttagttaattaatgttgaggca 147

                                                              
Query: 420 ggtcttaccatctagtacaggctggcaacagcacacctcctgccttccggc 470
           ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 146 ggtcttaccatctagtacaggctagcaacagcacacctcctgccttccggc 96


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space:   396060
Effective search space used:   396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)