MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-461F06
Chromosome	12 (Build37)
Map Location	87,583,063 - 87,583,227
singlet/doublet	singlet
Overlap gene	1700020O03Rik
Upstream gene	Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos, EG667124, Jundm2, LOC100042073, Batf, BC011209, 0610007P14Rik, Ttll5, Tgfb3, 1700019E19Rik
Downstream gene	LOC100042112, Esrrb, LOC667191, Vash1, Angel1, EG627607, LOC100042650, 6430527G18Rik, 2310044G17Rik, Zdhhc22, Tmem63c, Ngb, Pomt2, Gstz1, EG625237, Tmed8, Gm263, 4933437F05Rik, AI413782
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mlh3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217716 MGI:1353455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acyp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66204 MGI:1913454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810002I04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72350 MGI:1919600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nek9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217718 MGI:2387995
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmed10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68581 MGI:1915831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042549 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042549
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 6 Proteins pseudo : _no_value

name	LOC667119 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins pseudo : _no_value

name	Fos (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14281 MGI:95574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667124 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667124 MGI:3646120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Jundm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81703 MGI:1932093
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042073 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins

name	Batf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53314 MGI:1859147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC011209 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217721 MGI:2384974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	0610007P14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58520 MGI:1915571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttll5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320244 MGI:2443657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21809 MGI:98727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019E19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76411 MGI:1923661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700020O03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70373 MGI:1917623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042112 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Esrrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26380 MGI:1346832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667191 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Vash1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238328 MGI:2442543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Angel1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68737 MGI:1915987
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627607 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627607 MGI:3646959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins

name	LOC100042650 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 352 ESTs, 10 Proteins

name	6430527G18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238330 MGI:2442463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310044G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217732 MGI:1919185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238331 MGI:2685108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem63c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217733 MGI:2444386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ngb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64242 MGI:2151886
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pomt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217734 MGI:2444430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gstz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14874 MGI:1341859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625237 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625237 MGI:3647745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tmed8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382620 MGI:1923480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm263 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238333 MGI:2685109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	4933437F05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71275 MGI:1918525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI413782 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104799 MGI:2144805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mlh3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249061 GeneID:217716 MGI:1353455
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutL homolog 3 (E coli) transcript_id : NM_175337.1

name	Acyp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13384809 GeneID:66204 MGI:1913454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acylphosphatase 1, erythrocyte (common) type transcript_id : NM_025421.1

name	2810002I04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387509 GeneID:72350 MGI:1919600
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810002I04 gene transcript_id : NM_172414.2

name	Nek9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21553094 GeneID:217718 MGI:2387995
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 9 transcript_id : NM_145138.1

name	Tmed10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115311554 GeneID:68581 MGI:1915831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24-like trafficking protein 10 (yeast) transcript_id : NM_026775.4

name	Fos (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560587 GeneID:14281 MGI:95574
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FBJ osteosarcoma oncogene transcript_id : NM_010234.2

name	EG667124 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393023 GeneID:667124 MGI:3646120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667124 transcript_id : XM_988509.1

name	Jundm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982607 GeneID:81703 MGI:1932093
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Jun dimerization protein 2 transcript_id : NM_030887.2

name	LOC100042073 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263340 GeneID:100042073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001477499.1

name	Batf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131194 GeneID:53314 MGI:1859147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic leucine zipper transcription factor, ATF-like transcript_id : NM_016767.2

name	BC011209 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130135 GeneID:217721 MGI:2384974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC011209 transcript_id : NM_145447.2

name	0610007P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892239 GeneID:58520 MGI:1915571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610007P14 gene transcript_id : NM_021446.2

name	Ttll5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487280 GeneID:320244 MGI:2443657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin tyrosine ligase-like family, member 5 transcript_id : NM_001081423.1

name	Tgfb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377266 GeneID:21809 MGI:98727
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor, beta 3 transcript_id : NM_009368.2

name	1700019E19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313191 GeneID:76411 MGI:1923661
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700019E19 gene transcript_id : NM_029601.1

name	1700020O03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475993 GeneID:70373 MGI:1917623
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700020O03 gene transcript_id : NM_027405.2

name	Esrrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542616 GeneID:26380 MGI:1346832
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : estrogen related receptor, beta transcript_id : NM_011934.2

name	Vash1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368240 GeneID:238328 MGI:2442543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vasohibin 1 transcript_id : NM_177354.3

name	Angel1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21362312 GeneID:68737 MGI:1915987
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angel homolog 1 (Drosophila) transcript_id : NM_144524.1

name	EG627607 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263350 GeneID:627607 MGI:3646959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : predicted gene, EG627607 transcript_id : XM_892281.3

name	LOC100042650 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263351 GeneID:100042650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 352 ESTs, 10 Proteins product : similar to ribosomal protein L21 transcript_id : XM_001479131.1

name	6430527G18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22003883 GeneID:238330 MGI:2442463
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430527G18 gene transcript_id : NM_145836.1

name	2310044G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343461 GeneID:217732 MGI:1919185
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310044G17 gene transcript_id : NM_173735.2

name	Zdhhc22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384075 GeneID:238331 MGI:2685108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC-type containing 22 transcript_id : NM_001080943.2

name	Tmem63c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475966 GeneID:217733 MGI:2444386
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 63c transcript_id : NM_172583.2

name	Ngb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543322 GeneID:64242 MGI:2151886
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroglobin transcript_id : NM_022414.2

name	Pomt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130103 GeneID:217734 MGI:2444430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-O-mannosyltransferase 2 transcript_id : NM_153415.3

name	Gstz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892597 GeneID:14874 MGI:1341859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione transferase zeta 1 (maleylacetoacetate isomerase) transcript_id : NM_010363.3

name	EG625237 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392982 GeneID:625237 MGI:3647745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG625237 transcript_id : XM_893545.2

name	Tmed8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360188 GeneID:382620 MGI:1923480
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 domain containing 8 transcript_id : NM_001033475.2

name	Gm263 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393037 GeneID:238333 MGI:2685109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : gene model 263, (NCBI) transcript_id : XM_138106.6

name	4933437F05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812876 GeneID:71275 MGI:1918525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933437F05 gene transcript_id : NM_027744.1

name	AI413782 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981633 GeneID:104799 MGI:2144805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI413782 transcript_id : NM_134044.2

name	Mlh3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249062 GeneID:217716 MGI:1353455
definition	GO_component : GO:0005712 - chiasma [Evidence IDA]; GO:0000793 - condensed chromosome [Evidence IDA]; GO:0000795 - synaptonemal complex [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019237 - centromeric DNA binding [Evidence IDA]; GO:0003682 - chromatin binding [Evidence IDA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0007144 - female meiosis I [Evidence IMP]; GO:0007140 - male meiosis [Evidence IMP]; GO:0006298 - mismatch repair [Evidence IEA]; GO:0008104 - protein localization [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0007130 - synaptonemal complex formation [Evidence IMP] codon_start : 1 note : mutL 3 product : mutL homolog 3 protein_id : NP_780546.1

name	Acyp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384810 CCDS:CCDS26055.1 GeneID:66204 MGI:1913454
definition	codon_start : 1 product : acylphosphatase 1, erythrocyte (common) type protein_id : NP_079697.1

name	2810002I04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369541 CCDS:CCDS26056.1 GeneID:72350 MGI:1919600
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72350 protein_id : NP_766002.1

name	Nek9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21553095 CCDS:CCDS26057.1 GeneID:217718 MGI:2387995
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : NIMA-related expressed kinase 9 protein_id : NP_660120.1

name	Tmed10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312062 GeneID:68581 MGI:1915831
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence ISS]; GO:0042589 - zymogen granule membrane [Evidence ISS] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006903 - vesicle targeting [Evidence ISS] codon_start : 1 note : transmembrane trafficking protein product : transmembrane emp24 domain-containing protein 10 protein_id : NP_081051.1

name	Fos (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753894 CCDS:CCDS26059.1 GeneID:14281 MGI:95574
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] [Evidence IC]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IMP] [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence IMP] codon_start : 1 product : FBJ osteosarcoma oncogene protein_id : NP_034364.1

name	EG667124 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393024 GeneID:667124 MGI:3646120
definition	codon_start : 1 product : hypothetical protein protein_id : XP_993603.1

name	Jundm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982608 CCDS:CCDS26060.1 GeneID:81703 MGI:1932093
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 function : transcription factor product : Jun dimerization protein 2 protein_id : NP_112149.2

name	LOC100042073 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263341 GeneID:100042073
definition	codon_start : 1 product : similar to ribosomal protein L35a protein_id : XP_001477549.1

name	Batf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949007 CCDS:CCDS26061.1 GeneID:53314 MGI:1859147
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : activating transcription factor B product : basic leucine zipper transcription factor-like protein_id : NP_058047.1

name	BC011209 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703892 CCDS:CCDS26062.1 GeneID:217721 MGI:2384974
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC217721 protein_id : NP_663422.1

name	0610007P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946822 CCDS:CCDS26063.1 GeneID:58520 MGI:1915571
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 note : c14orf1-like protein product : hypothetical protein LOC58520 protein_id : NP_067421.1

name	Ttll5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487281 GeneID:320244 MGI:2443657
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] codon_start : 1 note : polyglutamylase product : tubulin tyrosine ligase like family 5 protein_id : NP_001074892.1

name	Tgfb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678319 GeneID:21809 MGI:98727
definition	GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005160 - transforming growth factor beta receptor binding [Evidence IEA] GO_process : GO:0016049 - cell growth [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0009790 - embryonic development [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0040007 - growth [Evidence IEA]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : transforming growth factor beta-3 product : transforming growth factor, beta 3 protein_id : NP_033394.1

name	1700019E19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313192 CCDS:CCDS26064.1 GeneID:76411 MGI:1923661
definition	codon_start : 1 product : hypothetical protein LOC76411 protein_id : NP_083877.1

name	1700020O03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42475994 CCDS:CCDS26065.1 GeneID:70373 MGI:1917623
definition	codon_start : 1 product : hypothetical protein LOC70373 protein_id : NP_081681.2

name	Esrrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542617 CCDS:CCDS26066.1 GeneID:26380 MGI:1346832
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : estrogen receptor related 2 product : estrogen related receptor, beta protein_id : NP_036064.2

name	Vash1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893501 GeneID:238328 MGI:2442543
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA] codon_start : 1 exception : mismatches in translation product : vasohibin 1 protein_id : NP_796328.1

name	Angel1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362313 CCDS:CCDS26067.1 GeneID:68737 MGI:1915987
definition	codon_start : 1 exception : mismatches in translation product : angel homolog 1 protein_id : NP_653107.1

name	EG627607 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393035 GeneID:627607 MGI:3646959
definition	codon_start : 1 product : similar to LOC314328 protein protein_id : XP_897374.2

name	LOC100042650 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263352 GeneID:100042650
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479181.1

name	6430527G18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003884 CCDS:CCDS26068.1 GeneID:238330 MGI:2442463
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : polyglutamine-containing protein product : hypothetical protein LOC238330 protein_id : NP_665835.1

name	2310044G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424567 GeneID:217732 MGI:1919185
definition	codon_start : 1 product : RIKEN cDNA 2310044G17 protein_id : NP_776096.1

name	Zdhhc22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124301180 GeneID:238331 MGI:2685108
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC-type containing 22 protein_id : NP_001074412.1

name	Tmem63c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369826 CCDS:CCDS26069.1 GeneID:217733 MGI:2444386
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 63c protein_id : NP_766171.1

name	Ngb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11967939 GeneID:64242 MGI:2151886
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005344 - oxygen transporter activity [Evidence IDA] GO_process : GO:0015671 - oxygen transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : neuroglobin protein_id : NP_071859.1

name	Pomt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70794795 CCDS:CCDS26070.1 GeneID:217734 MGI:2444430
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS] GO_function : GO:0004169 - dolichyl-phosphate-mannose-protein mannosyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : protein-O-mannosyltransferase 2 protein_id : NP_700464.2

name	Gstz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754092 CCDS:CCDS26071.1 GeneID:14874 MGI:1341859
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0004364 - glutathione transferase activity [Evidence TAS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016034 - maleylacetoacetate isomerase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009072 - aromatic amino acid family metabolism [Evidence IEA]; GO:0006559 - L-phenylalanine catabolism [Evidence TAS]; GO:0006572 - tyrosine catabolism [Evidence TAS] codon_start : 1 note : maleylacetoacetate isomerase product : glutathione transferase zeta 1 (maleylacetoacetate isomerase) protein_id : NP_034493.1

name	EG625237 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942795 GeneID:625237 MGI:3647745
definition	codon_start : 1 product : similar to Gag protein_id : XP_898638.1

name	Tmed8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794627 CCDS:CCDS26072.1 GeneID:382620 MGI:1923480
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : transmembrane emp24 domain containing 8 protein_id : NP_001028647.1

name	Gm263 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393038 GeneID:238333 MGI:2685109
definition	codon_start : 1 product : hypothetical protein protein_id : XP_138106.6

name	4933437F05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812877 GeneID:71275 MGI:1918525
definition	GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC71275 protein_id : NP_082020.1

name	AI413782 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981634 CCDS:CCDS26074.1 GeneID:104799 MGI:2144805
definition	codon_start : 1 product : hypothetical protein LOC104799 protein_id : NP_598805.2

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 1 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 2 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 3 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 4 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 5 pseudo : _no_value

name	LOC667191 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667191
definition	number : 1 pseudo : _no_value

name	LOC100042549 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263349 GeneID:100042549
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 6 Proteins product : similar to High mobility group box 1 pseudo : _no_value transcript_id : XR_033996.1

name	LOC667119 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263339 GeneID:667119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins product : hypothetical LOC667119 pseudo : _no_value transcript_id : XR_033241.1

clone name	MSMg01-426J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323J14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-461F06.T7 (MSMg01no461_f06.b1)	MSMg01-461F06.TJ (MSMg01no461_f06.g1)
ACC	AG546477	AG546478
length	766	926
length of high quality (start - end)	166 (83 - 248)	40 (76 - 115)
definition	CHROMAT_FILE: MSMg01no461_f06.b1 PHD_FILE: MSMg01no461_f06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:34:53 2005	CHROMAT_FILE: MSMg01no461_f06.g1 PHD_FILE: MSMg01no461_f06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:34:53 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	AACCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTGCACCGGGGC GGNAATCCCTCTGTTCCCAAAAAGAGAGAGGNATCGCAACACCATCAGAG AGATGAAGAAAGCCGTGTTTTGACCGACTCTCCACCATGCCCAGCCCGTC CTCGAGGGCTAATGGGACCCTGGCCCGGGACACCAAGCCTAAGCTCTCGC TGTCGCCCACCGAAGAGACAGAGTGGAGGGGACTGTCGCCACGGAGGTGT TTTGACCCTCAGAGCCCAGGCTGGGAAGACGCGCCTAGGGCAGCCAGGCC CCGCCACCCTCGGTCTTTCTCCTTTTCCCCGCTGCGCCCTCGGCCGCCCT GACACATTTGGAACCCTGATCCTGCCCGGCACTGGTCCAGTCTCGCCGCC ATCCTTCCCCTCACTGGCTGCCGTATTCGTATCGTACCCGGCGCCGCCTT CTTGTTCGCAGCTCCCAGCCTGGCTTTCCCTCTCTGACCTCTTTTCCCGT CTGGCCCTATTTATCTGCCCCTGAACTGATTACGGCAGTGACCCTTAACC ATTTACTCCCCCCATCCCCCCTCCCTTTTCCTCATTTCCTTTTTTTACCA ATTCAACTTCTTACATAACTCTTTTCTACTACACATCATATCCTCTCTTA ATTTTTTTTTTTCTTCTTCTCCTGTCCCCTACTTCCCTTCCATCCTCCCT ATCCCATTCCTTCTTAACTTCTTTTCCACTCCCTCTTAATTACCCCTCCC TCTCCTTCTTATTTTC	TCGATGCTGTGGTTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXATGGAGGTGAGGGAGTCACCTCAGA GACTCACCCGCCGGGAGTACCGCGAGCACTGGGGGGGGGGGTGGTATGCT CTTCCCTCTTCTCTTATTTTTCTGCTTTCTCTTCTTCTTCTCCTCTTTTT TTTCTCCCCCTTTCCCCCTCCTTTCCTTTCTTATCTTTTTTTTCTCCCCC CCCTTTTTTTTTTTTCCCCTCCCCTTCTTCCTCCTTCCTCTCCCCCTTTT CTCCTTTCTTCCCCTTCTCCCCCCTTTCATATTCTCCCCTCTTCTCTTTC CCCCTTTTTCCCTCTTCCCTTTTTTTTTCCCCTTTTTTTTTTTTCTTCCT CTTTTTTTCTCCCTTCTTTTCTCCTCTTTTTCTCTCTCTCTTCCTTTCCT CCCCTTTTTTTTCCCCCTCCTTTCTTTCCCTTTTTTTCCCCTTTTTTCTC TCTCCCTCCCTTTCCTCTCTCCCTTCCTCCCCCTCTTATTTATCTCTTCC TCTTCTCCTCCCCCTTTCCTTCTTCTCTCTCTCCCTTTCCTCCCTTCCTC TTCTTTCCCGCTCCCTCTTTCTTCTTCCCTCTTCCCTTTTCTTCCTTTTC CTTTCTCTTTCCCCTTTCCTTCTCTTTTCTCGCTTTCTTCTTTCTCTCTC TCCTTTTCCCTTCTCCCTCTTCTTTTTTCTCCCTTCTCCTCCTTTCTTCC CTCTCCCCTCTCTCCTCTATCTCTCTCTCTCCCCTCTCCTCTTTCCCCCT TCCTCCTTTCTCTTCCTCTTCCCCTCTCTCTATCTCCCCCCTTTCCTCCC TTTACTCCTTCACTCTTTTCCTTTTCTACTATTTTTTTTTTTCTCCTTCT TCCCTTCCCTTTCTATTTTTTTCTCG
quality values	Open. Hide. 6 6 6 7 6 6 8 8 22 21 17 24 27 18 13 3 0 3 23 16 13 11 12 10 11 7 8 3 0 3 17 19 15 9 9 7 7 7 6 6 6 6 7 8 9 9 9 9 9 17 8 3 0 3 14 15 29 30 43 23 23 9 9 9 9 7 7 6 6 6 6 12 10 10 12 21 28 28 23 23 3 0 3 25 25 39 41 47 50 50 33 33 36 36 36 36 53 53 57 59 50 37 40 37 37 33 36 39 59 59 48 39 39 32 33 32 35 47 47 34 30 13 10 10 11 13 19 28 37 37 33 33 33 33 47 47 50 50 48 47 47 47 47 47 50 48 59 59 59 57 57 57 53 68 68 68 68 68 46 27 24 11 11 11 16 23 31 39 39 47 44 40 32 30 30 41 40 48 57 68 57 48 44 43 43 43 44 44 48 57 57 48 48 54 59 59 57 44 43 41 59 59 59 59 57 57 57 59 54 54 54 46 46 37 37 28 33 33 36 42 42 43 43 43 33 37 30 37 33 30 30 30 37 37 36 36 43 43 43 43 43 37 33 33 28 19 13 11 11 12 10 10 10 10 10 11 12 19 25 25 34 37 28 28 28 37 30 30 18 18 18 21 23 20 28 28 29 30 23 28 28 28 30 32 32 39 30 30 17 17 17 30 30 30 28 30 30 32 39 59 43 43 40 43 43 43 43 59 59 59 35 20 20 11 11 12 12 7 7 7 7 7 7 11 10 10 17 22 34 39 37 30 22 12 12 12 23 30 59 43 19 15 9 10 15 22 25 28 26 22 22 12 14 9 9 9 9 9 11 11 9 9 13 12 16 16 28 25 19 14 13 12 13 12 12 13 16 18 21 19 28 28 15 13 8 8 8 12 10 13 11 16 18 15 10 11 11 11 12 12 29 30 39 32 30 19 15 13 13 12 22 19 23 23 28 23 32 21 23 15 11 9 9 9 9 9 10 16 13 10 10 11 9 9 9 9 9 12 18 26 18 13 13 15 16 16 11 11 8 11 8 7 6 6 8 8 8 8 8 8 8 8 20 20 19 12 10 10 10 10 8 8 8 8 8 11 11 8 8 8 13 14 9 10 11 11 12 14 12 17 12 10 10 16 20 26 8 9 8 8 10 11 9 9 10 10 8 8 7 7 10 9 6 8 8 8 8 8 8 6 6 6 6 8 8 10 13 10 8 8 8 8 8 8 8 8 8 10 7 6 8 8 8 8 12 8 9 9 9 10 9 9 14 10 9 9 10 10 12 9 10 12 8 8 8 8 8 11 9 8 10 8 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 6 6 6 7 8 8 8 8 8 8 8 10 8 10 10 10 10 13 11 10 8 8 8 8 8 10 10 9 10 10 10 11 10 9 10 9 10 10 10 8 8 6 6 8 8 9 9 9 8 11 8 9 9 9 17 22 37 30 30 19 20 15 19 15 10 12 12 16 13 15 13 11 12 12 9 9 10 12 12 11 14 13 13 16 15 13 13 11 8 8 10 10 8 6 6 8 8 8 10 10 17 12 11 11 12 10 9 9 9 9 10 10 9 9 9 10 10 8 10 10 14 12 10 10 8 10 16 18 10 8 13 13 13 8 6 6 8 12 8 8 8 8 8 8 8 8 8 6 7 8 10 10 10 10 9 9 10 10 10 10 10 10 10 8 10 8 8 8	Open. Hide. 8 8 8 8 8 9 9 9 9 9 16 10 9 10 10 13 16 26 32 39 39 41 42 42 42 42 47 47 27 29 9 6 6 6 7 6 6 6 9 15 17 27 22 25 19 23 25 33 32 36 36 33 33 33 41 42 41 25 19 10 9 7 9 7 7 7 9 10 13 10 10 20 20 32 29 29 30 36 48 47 47 47 48 53 48 44 43 36 36 23 27 23 23 28 36 24 32 30 30 19 24 21 32 32 25 25 25 33 30 36 32 30 31 21 26 11 19 16 34 28 17 11 11 11 11 19 22 39 37 32 24 20 20 20 28 18 18 14 13 8 8 8 8 10 9 9 9 9 8 8 8 8 8 10 16 11 11 11 11 11 11 13 10 8 8 8 8 8 18 18 11 8 8 6 6 10 8 10 11 12 7 6 8 8 10 8 8 8 8 10 10 8 8 8 8 8 8 15 10 10 10 11 15 13 13 11 13 13 12 10 12 8 8 8 8 10 10 10 10 10 10 10 10 10 11 8 8 8 10 10 10 11 11 13 14 14 19 19 13 11 10 8 8 8 12 12 14 14 12 19 10 10 10 10 28 34 43 29 19 10 8 8 10 13 10 13 14 15 19 10 8 9 13 18 12 12 10 22 8 10 9 9 16 15 13 12 12 10 10 8 8 8 10 10 13 11 8 10 10 10 10 8 8 8 8 8 8 8 15 9 11 14 17 19 22 11 10 8 8 8 8 10 8 8 8 13 8 7 7 7 9 6 6 6 6 6 8 10 6 6 8 12 8 8 8 8 8 9 12 13 11 9 9 11 12 12 19 8 8 8 13 8 8 8 8 8 11 11 13 15 25 22 16 14 14 16 16 16 16 8 13 8 7 8 10 13 13 11 12 15 12 15 22 19 11 9 8 8 8 8 9 15 14 16 10 8 8 8 10 11 16 10 15 10 10 10 19 15 19 13 8 8 6 8 6 6 8 8 10 12 11 11 11 21 21 26 14 18 12 15 15 19 10 9 8 8 8 8 8 8 9 17 12 11 9 9 9 13 10 11 8 10 8 15 10 9 10 8 13 8 8 8 8 15 13 14 15 14 16 23 24 23 21 18 11 13 11 12 12 14 22 19 17 10 10 10 17 15 12 11 9 12 23 15 15 14 14 9 9 9 9 15 12 16 18 17 18 16 13 13 13 11 11 11 12 10 8 8 8 8 8 13 19 19 13 11 6 6 6 8 8 8 9 13 19 19 14 14 17 17 24 30 14 11 10 10 8 8 10 8 8 8 11 11 12 13 12 12 8 8 10 8 8 9 10 9 9 11 10 8 8 6 6 8 8 15 15 13 8 8 8 11 8 8 8 8 8 10 10 10 8 10 10 8 8 10 9 9 9 9 9 10 16 11 11 9 9 9 12 12 12 12 8 9 8 9 9 10 23 11 8 8 15 15 21 8 8 8 8 10 11 11 11 11 15 21 16 11 9 9 9 17 17 12 14 14 14 14 11 9 9 9 9 14 14 13 13 10 10 9 9 9 9 13 18 11 10 8 8 8 6 7 7 8 8 8 8 8 8 10 11 11 15 19 8 8 6 6 7 7 8 8 10 11 11 11 10 10 10 17 10 11 11 21 10 10 10 19 18 14 16 16 13 20 12 12 10 9 7 9 12 12 19 15 12 12 13 11 10 11 17 10 14 8 9 15 15 9 9 9 10 9 9 9 10 12 10 17 19 13 8 8 8 8 8 8 8 9 8 8 10 10 10 12 10 17 19 24 21 19 28 27 17 14 9 9 10 12 17 18 14 10 10 8 8 8 12 12 10 15 11 11 11 9 10 10 14 10 10 8 8 8 8 8 8 8 19 8 8 8 8 6 10 7 8 13 8 8 8 13 8 9 9 9 9 19 13 12 8 8 8 8 8 19 19 20 24 21 18 19 22 8 6 6 6 6 7 10 11 8 8 8 8 10 8 9 11 10 9 18 18 9 9 9 10 9 8 8 6 8 7 12 12 19 13 13 10 10 14 20 23 15 12 8 8 8 10 15 15 15 8 8 8 10 15 16 13 8 8 8 8 8 9 9 9 9 9 9 11 11 12 14 14 14 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no461_f06.b1 MSMg01no461_f06.b1 CHROMAT_FILE:
MSMg01no461_f06.b1 PHD_FILE: MSMg01no461_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:53 2005
         (166 letters)



>mm_chr12_87582863_87583428
          Length = 566

 Score =  281 bits (145), Expect = 2e-80
 Identities = 160/165 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcgcaacaccatcagagagatgaagaaagccgtgttttgaccgactctccaccatgccc 60
           |||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||||
Sbjct: 365 atcgcagcaccatcagagagatgaagaaagccgtgttttgaaggactctccacaatgccc 306

                                                                       
Query: 61  agcccgtcctcgagggctaatgggaccctggcccgggacaccaagcctaagctctcgctg 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agcccgtcctcgagggctaaggggaccctggcccgggacaccaagcctaagctctcgctg 246

                                                        
Query: 121 tcgcccaccgaagagacagagtggaggggactgtcgccacggagg 165
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tcgcccaccgaagagacagagtggaggggactgtcgccacggagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space:    88164
Effective search space used:    88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information