Query= MSMg01no461_n12.b1 MSMg01no461_n12.b1 CHROMAT_FILE:
MSMg01no461_n12.b1 PHD_FILE: MSMg01no461_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:36 2005
(455 letters)
>mm_chr12_76273202_76274055
Length = 854
Score = 806 bits (417), Expect = 0.0
Identities = 446/457 (97%), Gaps = 5/457 (1%)
Strand = Plus / Plus
Query: 1 ttagtggataacctcacatcaaaaaatattatttgaattcccaatttttcaaaaacagca 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttagtggataacctcacatcaaaaaatattatttgaatttacaatttttcaaaaacagca 260
Query: 61 atgtaatttaccatcactcaaactagccatagctagatactcattaggaattcaggaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtaatttaccatcactcaaactagccatagctagatactcattaggaattcaggaaga 320
Query: 121 acgcacggggtaagatatgctgcccgtgagaatgggaacattgagcgttttaacatgttt 180
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 acgcacggg-taagatatgctgcccgtgagaatgggaacattgagcgttttaacatgtct 379
Query: 181 tgtcttttgaaactagtattccatctaaaagactcttgggtatttaactcta--ttggtg 238
||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||
Sbjct: 380 tgtcttttgaaactagtattccatctaaaagtctcttgggtatttaactctacct--gtg 437
Query: 239 attttacaactctttagtaaacaacctagtgtttactattaaaaatagcttgcatgaaca 298
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 438 attttacaactctttagtaaacaacctagtgtttactaaaaaaaatagcttgcatgaaca 497
Query: 299 ctgaccatataaagatggcagagctcctgacaatttttcctgacacagatttggtccata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctgaccatataaagatggcagagctcctgacaatttttcctgacacagatttggtccata 557
Query: 359 gctactcaggaaaggagtcaataatggcgctgttcgggtgtcatgaacttaaccacagtt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gctactcaggaaaggagtcaataatggcgctgttcgggtgtcatgaacttaaccacagtt 617
Query: 419 atcaagccctcccttcttcatagcttattttgatcca 455
|||||||||||||||||||||||||||||||||||||
Sbjct: 618 atcaagccctcccttcttcatagcttattttgatcca 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_n12.g1 MSMg01no461_n12.g1 CHROMAT_FILE:
MSMg01no461_n12.g1 PHD_FILE: MSMg01no461_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:36 2005
(424 letters)
>mm_chr12_76451367_76452191
Length = 825
Score = 741 bits (383), Expect = 0.0
Identities = 413/423 (97%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 1 cctccccccaccccttttagaaggtcttgttcagattgaagacaagagggtttaaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 508 cctccccccaccccttttagaaggtcttgttcagattgaagacaagagggtttgaagaca 449
Query: 61 gattaatctccttttccccttaggcatttttcatttcagttt-aaaaccttctgagaagc 119
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 448 gattaatctctttttccccttaggcatttttcatttcagtttaaaaaccttctgagaagc 389
Query: 120 tgtgattgctgtgccctctcacttcagccacagtcccattttcaggggatctagaatcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 388 tgtgattgctgtgccctctcacttcagccacagtcccattttcaggggatctagagtcca 329
Query: 180 gcagttcccctttatttgatgataaagatgccacagtgcattgatttgaactgtgaagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcagttcccctttatttgatgataaagatgccacagtgcattgatttgaactgtgaagct 269
Query: 240 ctttataaaacacaccttcagtgttcaaaaattggttggacattagccttgggttggatg 299
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caatagaaaacacaccttcagtgttcaaaaattggttggacattagccttgggttggatg 209
Query: 300 tagggttagtcctctgagaggctctacccagcagtcagtcaatgaaaagagatgcaaaga 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 208 tagggttagtcctctgagaggctctacccagcagtcagtcaatggaaagagatgcggaga 149
Query: 360 ttcacacccaaacactagctggagctcaagaagtctttcagaaaagttgggagaaagact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ttcacacccaaacactagctggagctcaagaagtctttcagaaaagttgggagaaagact 89
Query: 420 gaa 422
|||
Sbjct: 88 gaa 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
