Query= MSMg01no461_n20.b1 MSMg01no461_n20.b1 CHROMAT_FILE:
MSMg01no461_n20.b1 PHD_FILE: MSMg01no461_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:38 2005
(424 letters)
>mm_chr12_78018159_78018982
Length = 824
Score = 781 bits (404), Expect = 0.0
Identities = 416/420 (99%)
Strand = Plus / Plus
Query: 5 ggaattcacattgtattcccggctagcctttggtagggcatgtgtgagggtgcacatgga 64
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcacattgtagaccaggctagcctttggtagggcatgtgtgagggtgcacatgga 264
Query: 65 gatcagagggcaatctcgttgcttgagcatctcactaggacagtctcaacaacgtcttgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatcagagggcaatctcgttgcttgagcatctcactaggacagtctcaacaacgtcttgc 324
Query: 125 ctgttactggctgcatagccaataagccctgcggtcttcctgtctctgcctccctgctgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgttactggctgcatagccaataagccctgcggtcttcctgtctctgcctccctgctgc 384
Query: 185 tgggattataagtgccccaaccacacctggccttttacatggtgactggggaccaaactc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgggattataagtgccccaaccacacctggccttttacatggtgactggggaccaaactc 444
Query: 245 aggttctatggtttctcagagaacattttgctagctgagtcatctcccagtacgtcagtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggttctatggtttctcagagaacattttgctagctgagtcatctcccagtacgtcagtg 504
Query: 305 actctttcttagacttacgtgagggctagtgggatggttcagtgggttgccacgcaagac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 actctttcttagacttacgtgagggctagtgggatggttcagtgggttgccacacaagac 564
Query: 365 cctgagctcaattcagttgtggaaagggagacttgactcctgcaacttgtcctctgactc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctgagctcaattcagttgtggaaagggagacttgactcctgcaacttgtcctctgactc 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_n20.g1 MSMg01no461_n20.g1 CHROMAT_FILE:
MSMg01no461_n20.g1 PHD_FILE: MSMg01no461_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:38 2005
(337 letters)
>mm_chr12_78199604_78200339
Length = 736
Score = 605 bits (313), Expect = e-177
Identities = 331/337 (98%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 1 atctggatccaagcaagccttgctctaaccaaacaccctcagtttctcagacttggattc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atctgggtccaagcaagccttgctctaaccaaacaccctcagtttctcagacttggattc 477
Query: 61 agttcaggggtaggtagaaaactgaggttggctaagaaatactcaagctattcctaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agttcaggggtaggtagaaaactgaggttggctaagaaatactcaagctattcctaaaaa 417
Query: 121 agaaatgacacagcctctaccctcaagttgccaactgcctactcaaggattctcggcctt 180
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agaaatgatacagcctct-ccctcaagttgccaactgcctactcaaggattctcggcctt 358
Query: 181 ttaagaacatctacagacacctcaagccaaagtaaatacgacagagtggagggagtggag 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 357 ttaagaacatctacagacacctcaagccgaagtaaatacgacagagtggagggagtggag 298
Query: 241 gtgctgagggggcgtgaggtttaaaaggagaacccagaactcagcagaactcttcaggta 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 297 gtgctgagggggcgtaaggtttaaaaggagaacccagaactcagcagaactcttcaggga 238
Query: 301 aagtttcctagacatggcaacaacttgatttttctaa 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 aagtttcctagacatggcaacaacttgatttttctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 736
Length adjustment: 9
Effective length of query: 328
Effective length of database: 727
Effective search space: 238456
Effective search space used: 238456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
