Query= MSMg01no463_p11.b1 MSMg01no463_p11.b1 CHROMAT_FILE:
MSMg01no463_p11.b1 PHD_FILE: MSMg01no463_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:34 2005
(529 letters)
>mm_chr12_61135628_61136558
Length = 931
Score = 975 bits (504), Expect = 0.0
Identities = 522/528 (98%), Gaps = 2/528 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttgg-atattctacttccttatgatacataggacttccttataatg-cccccc 61
||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 731 ggaattcttggaaaattctacttccttatgatacataggacttccttataatgccccccc 672
Query: 62 caaattcacagcttcaatttattgatctttagtattcacttaaccataggacagatagac 121
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 671 caaattcacagcttcaatttattgatctttagtattcagttaaccataggacagatagac 612
Query: 122 ctcaccagctggtctcataaatttctcacaactgtatcccgtagtaatgataatctcatg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctcaccagctggtctcataaatttctcacaactgtatcccgtagtaatgataatctcatg 552
Query: 182 gccactttaaacagcaattgtcatggcctaggatcaacactaatgatagatcttaaaaat 241
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 551 gccactttaaacagcaattgtcatggcctaggatcagcactaatgatagatcttaaaaat 492
Query: 242 actcttttttttttatgaaagtaatttgttttgggaggaaaaggttctcatgagaatgtt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 actcttttttttttatgaaagtaatttgttttgggaggaaaaggttctcatgagaatgtt 432
Query: 302 ttaaggatcaaaccagaagaatgtttctgagcaccttgtccaggtgcagacagatgcctg 361
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 431 ttaaggatcaaaccagaagaatgtttctgagcgccttgtccaggtgcagacagatgcctg 372
Query: 362 atgaaacagagcacagctttgggtagtttcaaaggagcagcatcctgctcaccagccagc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atgaaacagagcacagctttgggtagtttcaaaggagcagcatcctgctcaccagccagc 312
Query: 422 atggtaagtgttcatcatagcaaaagcaacttcatacaagatgggatatatgtagttcat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atggtaagtgttcatcatagcaaaagcaacttcatacaagatgggatatatgtagttcat 252
Query: 482 cataagctcatgtaaaacattttgttgcatccctggggccgaaataca 529
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cataagctcatgtaaaacattttgttgcatccctggggccgaaataca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 931
Length adjustment: 10
Effective length of query: 519
Effective length of database: 921
Effective search space: 477999
Effective search space used: 477999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_p11.g1 MSMg01no463_p11.g1 CHROMAT_FILE:
MSMg01no463_p11.g1 PHD_FILE: MSMg01no463_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:34 2005
(240 letters)
>mm_chr12_60971512_60972151
Length = 640
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%)
Strand = Plus / Plus
Query: 1 tacatacatggaagcagtcatcattacctaatccttagccttctctagcatatttaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatacatggaagcagtcatcattacctaatccttagccttctctagcatatttaagtt 260
Query: 61 gtataatactggagattcctaatgaatttatacgtgcatttttgggaagcgttaaaatat 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gtataatactggagattcctaatgaatttatacatgcatttttgggaagcgttaaaatat 320
Query: 121 tgatctacatatttatcataatagctaccaaaatcttgagtgattttgtagaaattgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatctacatatttatcataatagctaccaaaatcttgagtgattttgtagaaattgaca 380
Query: 181 gaagtttaaggtctatacagaaataaaaagtgagctggtaagttaggtcagtgaacaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagtttaaggtctatacagaaataaaaagtgagctggtaagttaggtcagtgaacaaaa 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
