Query= MSMg01no465_i17.b1 MSMg01no465_i17.b1 CHROMAT_FILE:
MSMg01no465_i17.b1 PHD_FILE: MSMg01no465_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:41 2005
(242 letters)
>mm_chr12_87190147_87190788
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 agagtgctccagcatctgaacttgaggcatagttacttcgagattgctgatcttacagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgctccagcatctgaacttgaggcatagttacttcgagattgctgatcttacagct 260
Query: 61 aaccggggcttgccatgtctttgaaaaattatgctctaccactaagaacagttacagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccggggcttgccatgtctttgaaaaattatgctctaccactaagaacagttacagaca 320
Query: 121 taaaatttaaatgatttgtgcttggatgcgctgtgtttatgtttgataggatgacagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaatttaaatgatttgtgcttggatgcgctgtgtttatgtttgataggatgacagtga 380
Query: 181 taatttatgtaagaacacagtagtgtcatccaggcacatgccatcttgggcatttttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatttatgtaagaacacagtagtgtcatccaggcacatgccatcttgggcatttttgct 440
Query: 241 ca 242
||
Sbjct: 441 ca 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no465_i17.g1 MSMg01no465_i17.g1 CHROMAT_FILE:
MSMg01no465_i17.g1 PHD_FILE: MSMg01no465_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:41 2005
(284 letters)
>mm_chr12_87397141_87397824
Length = 684
Score = 505 bits (261), Expect = e-147
Identities = 279/285 (97%), Gaps = 2/285 (0%)
Strand = Plus / Minus
Query: 1 aggcagagcctctctccatcgttgtttgggatgagtagactgagctggctcactgagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aggcagagcctctctccatcgttgtttgggatgagtagactgagctggctcactgagaaa 425
Query: 61 accgcaccactgcccgggcacacttccctcctgcagggtgcagaattctcaaacatggag 120
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 424 actgcaccacttcccgggcacacttccctcctgcagggtgcagaattctcaaacacggag 365
Query: 121 gcaatggcttagatgtgtgaacatttatacggatcttgtggctggggagagatggttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gcaatggcttagatgtgtgaacatttatacggatcttgtggctggggagagatggttcag 305
Query: 181 tgggttaagtgtctgtgagtttagctccctggcacccatatgaaatggaggcacagtagt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tggg-taagtgtctgtgagtttagctccctggcacccatatgaaatggaggcacagtagt 246
Query: 241 gtcatgtggtatctcagtcctggaga-gggggaagtggaggagac 284
| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 245 gccatgtggtatctcagtcctggagaggggggaagtggaggagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
