Query= MSMg01no465_n20.b1 MSMg01no465_n20.b1 CHROMAT_FILE:
MSMg01no465_n20.b1 PHD_FILE: MSMg01no465_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:07 2005
(489 letters)
>mm_chr12_7574974_7575862
Length = 889
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%)
Strand = Plus / Minus
Query: 5 gaattctgctacttaccagtgcttgcatcacttaagaatctgttaaaatgctgtttcaga 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gaattctgctacttagcagtgcttgcatcacttaagaatctgttaaaatgctgtttcaga 809
Query: 65 cttcacatggtagctactgtatatgagtttgcatatatgcttatcatgcaaatacaatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 cttcacatggtagctactgtatatgagtttgcatatatgcttatcatgcaaatacaatag 749
Query: 125 gatttgcatgtgcacttatagcttaattgtttatatttcttcaaaatgtatatgttgacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gatttgcatgtgcacttatagcttaattgtttatatttcttcaaaatgtatatgttgacc 689
Query: 185 taggtgtggtggtacacgcctatagttctagaaactcaggatattgagacaggaggatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 taggtgtggtggtacacgcctatagttctagaaactcaggatattgagacaggaggatga 629
Query: 245 ggcctacttgggttatataatggtatatatatactatagactttaatgtgataatgtttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggcctacttgggttatataatggtatatatatactatagactttaatgtgataatgtttc 569
Query: 305 aagaagacatgtttgggaggcaagtagatttaaaggaagtcattatggaggagatcccac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aagaagacatgtttgggaggcaagtagatttaaaggaagtcattatggaggagatcccac 509
Query: 365 gtggagactagtgtccgagtagtaaaaagaaaagactaaaattctttctctctctctctc 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 508 gtggagactagtgtccgagtagtaaaaagaaaagactaaaattctttgtctctctctctc 449
Query: 425 tctctctctctctctctctctc 446
||||||||||||||||||||||
Sbjct: 448 tctctctctctctctctctctc 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_n20.g1 MSMg01no465_n20.g1 CHROMAT_FILE:
MSMg01no465_n20.g1 PHD_FILE: MSMg01no465_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:08 2005
(549 letters)
>mm_chr12_7406574_7407522
Length = 949
Score = 1021 bits (528), Expect = 0.0
Identities = 542/547 (99%)
Strand = Plus / Plus
Query: 1 aatattaaggaaggaatttcagacagagaaagaactagaatccatcacctgaaatgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatattaaggaaggaatttcagacagagaaagaactagaatccatcacctgaaatgggtg 260
Query: 61 cttttctcaagtaatgtgcctgagaaaataaatgaagatcaaggtagcaagagtcttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttctcaagtaatgtgcctgagaaaataaatgaagatcaaggtagcaagagtcttgtg 320
Query: 121 atgaaatccataggagttgtaggatatttttttcttggtaaagaaaggacagtatagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaaatccataggagttgtaggatatttttttcttggtaaagaaaggacagtatagtct 380
Query: 181 taggattctgtgaactagttgatatttcagagatagtttacaattagttatgatagagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggattctgtgaactagttgatatttcagagatagtttacaattagttatgatagagat 440
Query: 241 atttacttcaggaaagtagacaaatgctataaattaggttttttttcaatcaatctccag 300
|||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 atttacaccaggaaagtagacaaatgctataaattaggttttctttcaatcaatctccag 500
Query: 301 gcattactcccattctacctccattcagaaagcttgctgaacatttataggatggcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcattactcccattctacctccattcagaaagcttgctgaacatttataggatggcccag 560
Query: 361 actagagacaatatattcatttgtgttttattagttagggagtgaggaaaatctgaagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actagagacaatatattcatttgtgttttattagttagggagtgaggaaaatctgaagct 620
Query: 421 actgcttgagggcctttggcataatagaaagtcttttaaaccagggcaaaggtgacatca 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 actgcttgagggcctttggcataatagagagtcttttaaaccagggcaaaggtgacatca 680
Query: 481 tccaaggagagttcgaagaaaggagaanattaggatatacagtaagctgaagaaaaaggg 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 tccaaggagagttcgaagaaaggagaaaattaggatatacagtaagctgaagaaaaaggg 740
Query: 541 tcaagac 547
|||||||
Sbjct: 741 tcaagac 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
