Query= MSMg01no466_j06.b1 MSMg01no466_j06.b1 CHROMAT_FILE:
MSMg01no466_j06.b1 PHD_FILE: MSMg01no466_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:07 2005
(424 letters)
>mm_chr12_114131923_114132747
Length = 825
Score = 806 bits (417), Expect = 0.0
Identities = 423/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 1 atgcctaagtagaaggaatcacacagaattgccaccatgtggctgtttagactgaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcctaagtagaaggaatcacacagaattgccaccatgtggctgtttagactgaaaaaa 260
Query: 61 aaaaaaa-gcactttcacatggttcatcctgacagaaccaaagaccacctagttgtgaaa 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaagcactttcacatggttcatcctgacagaaccaaagaccacctagttgtgaaa 320
Query: 120 gtcagagggacccataaggacgtgcatgggcgggccagcagtgtgaagggggtgggagtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagagggacccataaggacgtgcatgggcgggccagcagtgtgaagggggtgggagtc 380
Query: 180 cgtggtcctcatttcttgccattcctccataggtggaagctcttggtcaggcaattccag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtggtcctcatttcttgccattcctccataggtggaagctcttggtcaggcaattccag 440
Query: 240 tgctcttgtgcccgcctacaatgggctacatgtaggccatgcaggccatgcaggccatgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctcttgtgcccgcctacaatgggctacatgtaggccatgcaggccatgcaggccatgc 500
Query: 300 agatggggactctctcctggcacttcttagccctgctgctgatgctcaggcaccccacag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatggggactctctcctggcacttcttagccctgctgctgatgctcaggcaccccacag 560
Query: 360 ggctgctgtggtgggggtgcaggaggaggatgctatcatctcacaactctcctgtgacag 419
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 ggctgctgtggtgggggtgcaggaggaggatgctatcatctcagaactctcctgtgacag 620
Query: 420 gcttc 424
|||||
Sbjct: 621 gcttc 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_j06.g1 MSMg01no466_j06.g1 CHROMAT_FILE:
MSMg01no466_j06.g1 PHD_FILE: MSMg01no466_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:07 2005
(452 letters)
>mm_chr12_114315420_114316271
Length = 852
Score = 874 bits (452), Expect = 0.0
Identities = 452/452 (100%)
Strand = Plus / Minus
Query: 1 ctgaactcatgaggtggaggcaggagaatcaggagttcaaagttatcactggtttagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ctgaactcatgaggtggaggcaggagaatcaggagttcaaagttatcactggtttagata 706
Query: 61 gcaagttcaaagccagcctgggctacgggagaccttgtttcgaaaaaccaaaaccaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gcaagttcaaagccagcctgggctacgggagaccttgtttcgaaaaaccaaaaccaaaac 646
Query: 121 ccgtgcccctcttcccaaataggggtaccacttaattattttagggcaaactggcaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ccgtgcccctcttcccaaataggggtaccacttaattattttagggcaaactggcaggtt 586
Query: 181 aaaaacattacacgcgtccacccagtgatgagatctgcttccacaggagaacttcatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaaaacattacacgcgtccacccagtgatgagatctgcttccacaggagaacttcatgtt 526
Query: 241 tgtaactagcagaactttccgtgttcctcgtaaaaggcaacacataattagaaggacctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgtaactagcagaactttccgtgttcctcgtaaaaggcaacacataattagaaggacctc 466
Query: 301 ataatttctgttgctaaagtgaatggaatcttttcatatttcctggtttagtgtattgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ataatttctgttgctaaagtgaatggaatcttttcatatttcctggtttagtgtattgag 406
Query: 361 acacctaagttacaacagtcatataaccaatctttctcttttatagttttagctgttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acacctaagttacaacagtcatataaccaatctttctcttttatagttttagctgttttg 346
Query: 421 tggattttctaggcagacattatattgttcca 452
||||||||||||||||||||||||||||||||
Sbjct: 345 tggattttctaggcagacattatattgttcca 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
