TGGGAGGTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGAGAGACTGCACTGACAATCATGAAACTTGCATGAGAT
TGATCTAGGTCTTCCTTGGAATATATGCTACAGCTGTACATCTTGGTCTC
CTTTTGAAACTCCTAACAATGGGAGCAAGGGCTGTTTCTGACATCTTTGC
CAGATTTTGGGACCTCTTTCTTCATACTGAGTTCCCTGATCCAGTCTTAA
TATGAGGAAAAATGCCTAGTGTTGCAAGTTGATATGCCATGTTTGGTTGA
TATCCATAGAAAGCCTGCCCTTTTCTGAATATAAACAGAGGAGGAGTGGA
TTGTGTGTGGGAGGGGAGGTTTCTNTTTTTTTTTTTNTNNTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTNTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTNTTTTTTTTTTTTTTTTTTTTNTTTTTTNTTTTTTTTTTTT
TTTNTNNTTTTTTTTTTTTTTTTTTNTTTTTTTTTTNTTTTTNTTCTTTT
TTTTTTTTTTCTTNTTTTTTTTTTTGTTTTTTGTTTTTTTGTTTGTCTGT
TTTT

NAAATAATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGATTTGTTCTGCAT
TTTGAATATCTGTGAGAATTAAACAGTTACTTAAATCTATATCACTTTCG
CATGATATTTATCAAAACTATCCTTCATATCTGTATTATACAATCCAATT
AAAAAACATCATTTATTGAAGAATTACATGTTTTAATTCAATTAATTCTC
ATTAATCATGATTTTGCTACTATGATTTATGAAATTTCAAGAAAAAATGT
TTGTTTATATTTTCAAAATACCAGAAAAATAGATTAGTAATCATTTCAGT
ATATAAATAAGACTGGAAAGAATTATGAAGAATTGAGTATAACTCTGAGA
ATATATAGAATCATTCATTATTCAGGAAGTGATAATCTATTAAACCTTGA
AAAATATCAATCTATGAGACTTCTAACTGTTATAAAAATGGTAAGTGAGC
TGTGCTACAGGTGTGTGCATTTTGTCTTTCTGTAAGGTTAAAAATCTCAT
CTGTATTTTGCTTTAGNAATTTAGAAGGTATTAGCAAATAGAAAACTCTA
AAGTTATTATACAGAACACCCACTACTAGTTCTTTAAATGCCTGTGACTT
ATGACTTCAAGGAATATTGTATCTCTTCTGAGGCAAACTTTTATCTCTTT
CAGAAAAAACATCCCTCAGTGCTTCCCCAAAAAGATTTTTAAAAATCCAA
AAAGCTTGAACCTG

Query= MSMg01no468_o24.g1 MSMg01no468_o24.g1 CHROMAT_FILE:
MSMg01no468_o24.g1 PHD_FILE: MSMg01no468_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:20 2005
         (463 letters)



>mm_chr12_48190373_48191235
          Length = 863

 Score =  864 bits (447), Expect = 0.0
 Identities = 459/463 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggatttgttctgcattttgaatatctgtgagaattaaacagttacttaaatctatatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatttgttctgcattttgaatatctgtgagaattaaacagttacttaaatctatatca 260

                                                                       
Query: 61  ctttcgcatgatatttatcaaaactatccttcatatctgtattatacaatccaattaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttcgcatgatatttatcaaaactatccttcatatctgtattatacaatccaattaaaa 320

                                                                       
Query: 121 aacatcatttattgaagaattacatgttttaattcaattaattctcattaatcatgattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatcatttattgaagaattacatgttttaattcaattaattctcattaatcatgattt 380

                                                                       
Query: 181 tgctactatgatttatgaaatttcaagaaaaaatgtttgtttatattttcaaaataccag 240
           |||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 381 tgctaccatgatttatgaaatttcaagaaaaattgtttgtttacattttcaaaataccag 440

                                                                       
Query: 241 aaaaatagattagtaatcatttcagtatataaataagactggaaagaattatgaagaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaatagattagtaatcatttcagtatataaataagactggaaagaattatgaagaatt 500

                                                                       
Query: 301 gagtataactctgagaatatatagaatcattcattattcaggaagtgataatctattaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtataactctgagaatatatagaatcattcattattcaggaagtgataatctattaaa 560

                                                                       
Query: 361 ccttgaaaaatatcaatctatgagacttctaactgttataaaaatggtaagtgagctgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttgaaaaatatcaatctatgagacttctaactgttataaaaatggtaagtgagctgtg 620

                                                      
Query: 421 ctacaggtgtgtgcattttgtctttctgtaaggttaaaaatct 463
           |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 ctacaggtatgtgcattttgtctttctgtaaggttaaaaatct 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)