MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-469N17
Chromosome	12 (Build37)
Map Location	88,192,229 - 88,192,369
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ttll5, Tgfb3, 1700019E19Rik, 1700020O03Rik, LOC100042112, Esrrb, LOC667191, Vash1, Angel1, EG627607, LOC100042650
Downstream gene	6430527G18Rik, 2310044G17Rik, Zdhhc22, Tmem63c, Ngb, Pomt2, Gstz1, EG625237, Tmed8, Gm263, 4933437F05Rik, AI413782, Ahsa1, Thsd3, Sptlc2, LOC667287, Nrp, 1810035L17Rik, Snw1, LOC100042747, EG544883, EG666806, EG633031, Oog1, LOC100042776, LOC100042778, LOC100042239, LOC100042786, BB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ttll5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320244 MGI:2443657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21809 MGI:98727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019E19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76411 MGI:1923661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700020O03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70373 MGI:1917623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042112 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Esrrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26380 MGI:1346832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667191 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Vash1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238328 MGI:2442543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Angel1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68737 MGI:1915987
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627607 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627607 MGI:3646959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins

name	LOC100042650 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 352 ESTs, 10 Proteins

name	6430527G18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238330 MGI:2442463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310044G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217732 MGI:1919185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238331 MGI:2685108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem63c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217733 MGI:2444386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ngb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64242 MGI:2151886
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pomt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217734 MGI:2444430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gstz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14874 MGI:1341859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625237 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625237 MGI:3647745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tmed8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382620 MGI:1923480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm263 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238333 MGI:2685109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	4933437F05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71275 MGI:1918525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI413782 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104799 MGI:2144805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ahsa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217737 MGI:2387603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thsd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217738 MGI:2685110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	Sptlc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20773 MGI:108074
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667287 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 170 ESTs, 2 Proteins pseudo : _no_value

name	Nrp (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810035L17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380773 MGI:1916394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snw1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66354 MGI:1913604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	EG544883 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544883 MGI:3647569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 13 Proteins

name	EG666806 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666806 MGI:3643794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 10 ESTs, 13 Proteins

name	EG633031 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633031 MGI:3646386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins pseudo : _no_value

name	Oog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:193322 MGI:2679150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042776 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 14 ESTs, 13 Proteins

name	LOC100042778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 67 ESTs, 2 Proteins pseudo : _no_value

name	LOC100042239 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100042786 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins

name	BB287469 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544881 MGI:3034635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC100038964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 77 ESTs, 2 Proteins pseudo : _no_value

name	LOC673658 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100038992 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038992
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins

name	LOC100038982 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 9 Proteins

name	LOC674027 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039042 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 24 ESTs, 14 Proteins

name	LOC100039052 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 14 Proteins

name	LOC100039076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 12 Proteins

name	Ttll5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487280 GeneID:320244 MGI:2443657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin tyrosine ligase-like family, member 5 transcript_id : NM_001081423.1

name	Tgfb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377266 GeneID:21809 MGI:98727
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor, beta 3 transcript_id : NM_009368.2

name	1700019E19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313191 GeneID:76411 MGI:1923661
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700019E19 gene transcript_id : NM_029601.1

name	1700020O03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475993 GeneID:70373 MGI:1917623
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700020O03 gene transcript_id : NM_027405.2

name	Esrrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542616 GeneID:26380 MGI:1346832
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : estrogen related receptor, beta transcript_id : NM_011934.2

name	Vash1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368240 GeneID:238328 MGI:2442543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vasohibin 1 transcript_id : NM_177354.3

name	Angel1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21362312 GeneID:68737 MGI:1915987
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angel homolog 1 (Drosophila) transcript_id : NM_144524.1

name	EG627607 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263350 GeneID:627607 MGI:3646959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : predicted gene, EG627607 transcript_id : XM_892281.3

name	LOC100042650 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263351 GeneID:100042650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 352 ESTs, 10 Proteins product : similar to ribosomal protein L21 transcript_id : XM_001479131.1

name	6430527G18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22003883 GeneID:238330 MGI:2442463
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430527G18 gene transcript_id : NM_145836.1

name	2310044G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343461 GeneID:217732 MGI:1919185
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310044G17 gene transcript_id : NM_173735.2

name	Zdhhc22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384075 GeneID:238331 MGI:2685108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC-type containing 22 transcript_id : NM_001080943.2

name	Tmem63c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42475966 GeneID:217733 MGI:2444386
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 63c transcript_id : NM_172583.2

name	Ngb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543322 GeneID:64242 MGI:2151886
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroglobin transcript_id : NM_022414.2

name	Pomt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130103 GeneID:217734 MGI:2444430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-O-mannosyltransferase 2 transcript_id : NM_153415.3

name	Gstz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892597 GeneID:14874 MGI:1341859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione transferase zeta 1 (maleylacetoacetate isomerase) transcript_id : NM_010363.3

name	EG625237 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392982 GeneID:625237 MGI:3647745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG625237 transcript_id : XM_893545.2

name	Tmed8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360188 GeneID:382620 MGI:1923480
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 domain containing 8 transcript_id : NM_001033475.2

name	Gm263 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393037 GeneID:238333 MGI:2685109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : gene model 263, (NCBI) transcript_id : XM_138106.6

name	4933437F05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812876 GeneID:71275 MGI:1918525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933437F05 gene transcript_id : NM_027744.1

name	AI413782 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981633 GeneID:104799 MGI:2144805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI413782 transcript_id : NM_134044.2

name	Ahsa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122514 GeneID:217737 MGI:2387603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AHA1, activator of heat shock protein ATPase homolog 1 (yeast) transcript_id : NM_146036.1

name	Thsd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94393044 GeneID:217738 MGI:2685110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : thrombospondin, type I, domain containing 3 transcript_id : XM_138107.7

name	Sptlc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366849 GeneID:20773 MGI:108074
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine palmitoyltransferase, long chain base subunit 2 transcript_id : NM_011479.3

name	Nrp (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:62909988 GeneID:654309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural regeneration protein transcript_id : NM_001013372.1

name	1810035L17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802683 GeneID:380773 MGI:1916394
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810035L17 gene transcript_id : NM_026958.2

name	Snw1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328070 GeneID:66354 MGI:1913604
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SNW domain containing 1 transcript_id : NM_025507.1

name	LOC100042747 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263353 GeneID:100042747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100042747 transcript_id : XM_001479340.1

name	EG544883 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263355 GeneID:544883 MGI:3647569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 13 Proteins product : predicted gene, EG544883 transcript_id : XM_001479359.1

name	EG544883 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392985 GeneID:544883 MGI:3647569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 13 Proteins product : predicted gene, EG544883, transcript variant 1 transcript_id : XM_619013.3

name	EG666806 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392990 GeneID:666806 MGI:3643794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 9 ESTs, 13 Proteins product : predicted gene, EG666806, transcript variant 2 transcript_id : XM_994328.1

name	EG666806 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392988 GeneID:666806 MGI:3643794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 13 Proteins product : predicted gene, EG666806, transcript variant 1 transcript_id : XM_994314.1

name	Oog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38490532 GeneID:193322 MGI:2679150
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oogenesin 1 transcript_id : NM_178657.3

name	LOC100042776 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263358 GeneID:100042776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 14 ESTs, 13 Proteins product : hypothetical protein LOC100042776 transcript_id : XM_001479394.1

name	LOC100042786 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263361 GeneID:100042786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins product : similar to beacon transcript_id : XM_001479404.1

name	LOC100038992 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263411 GeneID:100038992
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins product : similar to beacon transcript_id : XM_001472024.1

name	LOC100038982 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263409 GeneID:100038982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 9 Proteins product : similar to REX1, RNA exonuclease 1 homolog (S. cerevisiae) transcript_id : XM_001472039.1

name	LOC100039042 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263413 GeneID:100039042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 24 ESTs, 14 Proteins product : hypothetical protein LOC100039042 transcript_id : XM_001472050.1

name	LOC100039052 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263415 GeneID:100039052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 14 Proteins product : hypothetical protein LOC100039052 transcript_id : XM_001472074.1

name	LOC100039076 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263418 GeneID:100039076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 12 Proteins product : hypothetical protein LOC100039076 transcript_id : XM_001472109.1

name	Ttll5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487281 GeneID:320244 MGI:2443657
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] codon_start : 1 note : polyglutamylase product : tubulin tyrosine ligase like family 5 protein_id : NP_001074892.1

name	Tgfb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678319 GeneID:21809 MGI:98727
definition	GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005160 - transforming growth factor beta receptor binding [Evidence IEA] GO_process : GO:0016049 - cell growth [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0009790 - embryonic development [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0040007 - growth [Evidence IEA]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : transforming growth factor beta-3 product : transforming growth factor, beta 3 protein_id : NP_033394.1

name	1700019E19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313192 CCDS:CCDS26064.1 GeneID:76411 MGI:1923661
definition	codon_start : 1 product : hypothetical protein LOC76411 protein_id : NP_083877.1

name	1700020O03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42475994 CCDS:CCDS26065.1 GeneID:70373 MGI:1917623
definition	codon_start : 1 product : hypothetical protein LOC70373 protein_id : NP_081681.2

name	Esrrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542617 CCDS:CCDS26066.1 GeneID:26380 MGI:1346832
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : estrogen receptor related 2 product : estrogen related receptor, beta protein_id : NP_036064.2

name	Vash1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893501 GeneID:238328 MGI:2442543
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA] codon_start : 1 exception : mismatches in translation product : vasohibin 1 protein_id : NP_796328.1

name	Angel1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362313 CCDS:CCDS26067.1 GeneID:68737 MGI:1915987
definition	codon_start : 1 exception : mismatches in translation product : angel homolog 1 protein_id : NP_653107.1

name	EG627607 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393035 GeneID:627607 MGI:3646959
definition	codon_start : 1 product : similar to LOC314328 protein protein_id : XP_897374.2

name	LOC100042650 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263352 GeneID:100042650
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479181.1

name	6430527G18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003884 CCDS:CCDS26068.1 GeneID:238330 MGI:2442463
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : polyglutamine-containing protein product : hypothetical protein LOC238330 protein_id : NP_665835.1

name	2310044G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424567 GeneID:217732 MGI:1919185
definition	codon_start : 1 product : RIKEN cDNA 2310044G17 protein_id : NP_776096.1

name	Zdhhc22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124301180 GeneID:238331 MGI:2685108
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC-type containing 22 protein_id : NP_001074412.1

name	Tmem63c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369826 CCDS:CCDS26069.1 GeneID:217733 MGI:2444386
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 63c protein_id : NP_766171.1

name	Ngb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11967939 GeneID:64242 MGI:2151886
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005344 - oxygen transporter activity [Evidence IDA] GO_process : GO:0015671 - oxygen transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : neuroglobin protein_id : NP_071859.1

name	Pomt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70794795 CCDS:CCDS26070.1 GeneID:217734 MGI:2444430
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS] GO_function : GO:0004169 - dolichyl-phosphate-mannose-protein mannosyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : protein-O-mannosyltransferase 2 protein_id : NP_700464.2

name	Gstz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754092 CCDS:CCDS26071.1 GeneID:14874 MGI:1341859
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0004364 - glutathione transferase activity [Evidence TAS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016034 - maleylacetoacetate isomerase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009072 - aromatic amino acid family metabolism [Evidence IEA]; GO:0006559 - L-phenylalanine catabolism [Evidence TAS]; GO:0006572 - tyrosine catabolism [Evidence TAS] codon_start : 1 note : maleylacetoacetate isomerase product : glutathione transferase zeta 1 (maleylacetoacetate isomerase) protein_id : NP_034493.1

name	EG625237 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942795 GeneID:625237 MGI:3647745
definition	codon_start : 1 product : similar to Gag protein_id : XP_898638.1

name	Tmed8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794627 CCDS:CCDS26072.1 GeneID:382620 MGI:1923480
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : transmembrane emp24 domain containing 8 protein_id : NP_001028647.1

name	Gm263 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393038 GeneID:238333 MGI:2685109
definition	codon_start : 1 product : hypothetical protein protein_id : XP_138106.6

name	4933437F05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812877 GeneID:71275 MGI:1918525
definition	GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC71275 protein_id : NP_082020.1

name	AI413782 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981634 CCDS:CCDS26074.1 GeneID:104799 MGI:2144805
definition	codon_start : 1 product : hypothetical protein LOC104799 protein_id : NP_598805.2

name	Ahsa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122515 CCDS:CCDS26075.1 GeneID:217737 MGI:2387603
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0001671 - ATPase stimulator activity [Evidence ISS]; GO:0030189 - chaperone activator activity [Evidence ISS]; GO:0051087 - chaperone binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006457 - protein folding [Evidence ISS] [Evidence IEA]; GO:0006950 - response to stress [Evidence ISS]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 product : AHA1, activator of heat shock 90kDa protein ATPase homolog 1 protein_id : NP_666148.1

name	Thsd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94393045 GeneID:217738 MGI:2685110
definition	codon_start : 1 product : hypothetical protein protein_id : XP_138107.7

name	Sptlc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755656 CCDS:CCDS26076.1 GeneID:20773 MGI:108074
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004758 - serine C-palmitoyltransferase activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016769 - transferase activity, transferring nitrogenous groups [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : serine palmitoyltransferase, long chain base subunit 2 protein_id : NP_035609.1

name	Nrp (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:62909989 CCDS:CCDS26077.1 GeneID:654309
definition	codon_start : 1 function : survival and neuronal proliferation induction, chemoattraction and promotion of neuronal differentiation product : neural regeneration protein protein_id : NP_001013390.1

name	1810035L17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47058962 GeneID:380773 MGI:1916394
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC380773 protein_id : NP_081234.1

name	Snw1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328071 GeneID:66354 MGI:1913604
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence ISS]; GO:0042809 - vitamin D receptor binding [Evidence ISS] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 exception : mismatches in translation product : SKI interacting protein protein_id : NP_079783.1

name	LOC100042747 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263354 GeneID:100042747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479390.1

name	EG544883 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263356 GeneID:544883 MGI:3647569
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479409.1

name	EG544883 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63635154 GeneID:544883 MGI:3647569
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_619013.1

name	EG666806 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392989 GeneID:666806 MGI:3643794
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_999408.1

name	EG666806 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392991 GeneID:666806 MGI:3643794
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_999422.1

name	Oog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38490533 GeneID:193322 MGI:2679150
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy product : oogenesin 1 protein_id : NP_848772.2

name	LOC100042776 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263359 GeneID:100042776
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479444.1

name	LOC100042786 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263362 GeneID:100042786
definition	codon_start : 1 product : similar to beacon protein_id : XP_001479454.1

name	LOC100038992 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263412 GeneID:100038992
definition	codon_start : 1 product : similar to beacon protein_id : XP_001472074.1

name	LOC100038982 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263410 GeneID:100038982
definition	codon_start : 1 product : similar to REX1, RNA exonuclease 1 homolog (S. cerevisiae) protein_id : XP_001472089.1

name	LOC100039042 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263414 GeneID:100039042
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472100.1

name	LOC100039052 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263416 GeneID:100039052
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472124.1

name	LOC100039076 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263419 GeneID:100039076
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472159.1

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 1 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 2 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 3 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 4 pseudo : _no_value

name	LOC100042112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042112
definition	number : 5 pseudo : _no_value

name	LOC667191 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667191
definition	number : 1 pseudo : _no_value

name	LOC100042239 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042239
definition	number : 4 pseudo : _no_value

name	LOC100042239 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042239
definition	number : 3 pseudo : _no_value

name	LOC100042239 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042239
definition	number : 2 pseudo : _no_value

name	LOC100042239 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042239
definition	number : 1 pseudo : _no_value

name	LOC673658 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673658
definition	number : 4 pseudo : _no_value

name	LOC673658 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673658
definition	number : 3 pseudo : _no_value

name	LOC673658 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673658
definition	number : 2 pseudo : _no_value

name	LOC673658 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673658
definition	number : 1 pseudo : _no_value

name	LOC674027 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674027
definition	number : 1 pseudo : _no_value

name	LOC674027 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674027
definition	number : 2 pseudo : _no_value

name	LOC674027 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674027
definition	number : 3 pseudo : _no_value

name	LOC667287 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263346 GeneID:667287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 170 ESTs, 2 Proteins product : hypothetical LOC667287 pseudo : _no_value transcript_id : XR_033365.1

name	EG633031 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149263357 GeneID:633031 MGI:3646386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins product : predicted gene, EG633031 pseudo : _no_value transcript_id : XR_034175.1

name	LOC100042778 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263360 GeneID:100042778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 67 ESTs, 2 Proteins product : similar to H3 histone, family 3A pseudo : _no_value transcript_id : XR_034181.1

name	BB287469 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149263407 GeneID:544881 MGI:3034635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence BB287469 pseudo : _no_value transcript_id : XR_035091.1

name	LOC100038964 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263408 GeneID:100038964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 77 ESTs, 2 Proteins product : similar to H3 histone, family 3A pseudo : _no_value transcript_id : XR_030517.1

clone name	MSMg01-503L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461G21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-436O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372M17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-474B14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-181H08
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-024B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-469N17.T7 (MSMg01no469_n17.b1)	MSMg01-469N17.TJ (MSMg01no469_n17.g1)
ACC	AG552994	AG552995
length	799	813
length of high quality (start - end)	147 (120 - 266)	---
definition	CHROMAT_FILE: MSMg01no469_n17.b1 PHD_FILE: MSMg01no469_n17.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:46:34 2005	CHROMAT_FILE: MSMg01no469_n17.g1 PHD_FILE: MSMg01no469_n17.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:46:35 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TAGTCCTCATGTCACTAAANGANTCACTATTCAAACAGATCCGCGGAATT CTCATGTTTGCATGAATTTCCCCATCCTGTGCTGAGGCTATAACAGGGTG GTTCCAGAGCTGACCTTACAGACCTAAAGGGCCTTTCTGTGAATGCAAGG TTACTCAGAGAGTCAAGTTCCTTGTCAAGAAGGCTAGGGGGCTTGCTTTA TATTCCAGGGCAAATCCATCAGGCTCACCGGAGATGAGTTGAGCTGTGAC GGGGGGTGGGAGGGTAGGGCTCTGCTGTAAAGAAAAACCTCCCATGGCCT TGCGCCCAGGCTTTTTTTTTGTTTAAAATGATGACCGGCTGGGCACAGCC TGCTGTTTTTATCCACCGCTTCTGAGGGCTCTAGACGGAGTTTCTACTTT CCGACACGCCCCGCCCAACTAATCCTTCACCATCTTTCCCCCCACTGCAT ACCTTATCACTTACCACCCCATGTCCTCCTTTCCTCTGTACTATATTCTA CCAGATATCCCCTTTCCTTTCTCTGTACCCTTTTTTTTCTCCACCCTTTC TTTTTCCGTTTCCCCCTTTCTTAGCCTCCCCACTCTTCTTTATCCCCCTC GTCTTTCCCCTTCCTTCTCCTTCCTTCCACTGCTCTCTCTCCCCTAGTAT CGCTCCACTTTTTCCTTTTTTTTTCCCTGCCTCACTCTCTCCCCCTCTAT CCAGCTTCTCCCCATCCCCACAACTTTCCCCTTTCCGTTCTCCTTTCCCA TACCCCCTCTTCCTTTAGCCCTCCTTTTCTCCCCTCCCTCTTCTCCTTN	NTGAAAGCCTGGNNNCGCTGTTTCAAAATTTAGTGAACTATAGACGTTGC GAGAACTGCTGTTAGAAGAGAGAGGAAAGAGAGGAGGGGAGGGGAGGGTG GGGGTCCTCTTTAANACCTCAAAANNGNCTGCAAAAATGCTCANNTGTCA AAAACCTGGGTTCCTCTCCNAAAGACCCGGTTTGATTCCCAGTGGGNACT GGGGNNTCCAACTCATTTTGCAACCCCTCTTGGNNNTTCCAACTCCTGGG AAACCCCTTTTCACAAAACCAGAAGTTTTTTCCCCCCCCTTTTTTTCTTA TAAAAACCCCCCCCTCCCCCTTTTTTTTTTTTTTTTATATCTCCCNGGGT CCCAAAAAAAATATTTTTTTTATTCCCCCCCAAACTTTTTTTTGGNTCCC TTCTTCTTTTTTTTTTCTTTATTTTTNNCCCCCCCCCCCCCACCTTTTTT TTCTTCTCCTTTTTTTCTGGGGGCCCCCCCTTTTTTTTTTTTTTATAACT CTTTTTTCCTCCTTTTTTTTATTTTTTTTTTTTTNNNNNTTTCTTTCCCT CCCTCTTTTTTCTCNNTTCCTTCTTTTTTTTCCNNTCTTCCCTCTCCTTC TCTCTTTTCTTTCTTCTTTTAAAAAAAATCCTTCTCCCCCNTTCCCTCTC TTNCTTTTTATACCCCCCTTAAAAATACACCTTTTNNCCTTTTCTCTTTT TCCCCCCCTCTTTTTCTTTTCCCCTTTCTNCCCCCTCTTTTTTTTTTTCC CCTTTCCTTCCTTTTTTTTTTTTTTCCTTTATTCCTTTCCCCTCTTTTAT TCTCCTCACGACC
quality values	Open. Hide. 6 6 6 6 12 10 11 8 8 8 8 10 10 10 10 17 9 9 3 0 3 3 0 3 12 12 11 6 7 7 11 7 7 6 7 6 6 6 8 8 10 14 18 27 33 19 17 11 13 15 23 25 17 16 9 10 10 12 9 7 7 7 7 8 9 10 10 14 16 26 26 35 32 32 39 39 37 53 44 44 39 43 43 57 57 44 44 43 43 40 41 37 37 37 37 32 29 36 34 34 23 23 22 29 29 31 31 31 33 25 18 19 12 14 15 21 18 13 13 13 22 27 39 34 34 28 28 28 30 30 28 25 25 36 34 48 43 39 36 30 28 28 33 31 31 31 39 43 43 36 42 42 39 42 40 40 33 36 37 43 43 43 39 39 29 32 32 32 30 39 41 42 42 32 32 42 42 57 57 44 37 18 18 27 27 41 33 33 27 41 33 35 41 47 47 48 48 48 48 48 57 57 57 57 57 47 47 43 39 42 35 35 37 42 44 46 48 48 57 57 48 44 42 42 37 43 43 37 37 28 37 31 32 32 39 42 39 43 43 37 42 37 43 43 47 40 37 23 26 18 12 11 12 24 30 39 39 40 37 37 23 32 23 26 26 28 16 10 10 8 8 10 11 6 6 8 10 8 8 13 15 15 18 12 11 11 12 20 22 30 20 20 20 15 25 13 11 11 11 12 22 12 7 6 8 8 13 21 21 23 21 20 12 12 17 27 32 9 9 7 7 7 7 11 11 11 14 12 22 12 10 10 9 9 9 10 8 8 8 8 15 8 8 8 15 17 17 10 8 10 8 15 17 15 9 9 10 12 13 12 10 10 10 10 10 10 11 12 12 18 18 18 17 15 12 12 12 12 12 13 10 10 10 13 10 11 11 11 11 13 13 12 13 12 13 10 11 10 10 10 10 12 11 12 11 8 8 6 6 8 8 9 9 9 12 10 8 8 8 9 8 10 10 11 8 12 8 8 8 10 10 10 10 16 15 15 10 10 10 10 15 13 11 11 12 15 10 10 8 8 8 8 10 10 9 7 8 8 8 8 10 8 8 8 10 10 8 12 15 15 11 10 10 8 10 6 6 6 6 8 13 12 13 16 12 9 9 9 9 9 8 10 11 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 9 10 10 10 15 9 9 9 8 11 12 13 10 10 15 15 15 13 13 16 13 13 9 10 10 12 10 15 13 13 13 12 10 11 11 12 22 10 12 12 11 11 10 10 8 8 8 8 10 11 13 10 9 9 9 9 10 10 11 11 8 8 8 8 8 9 9 10 12 10 10 10 10 10 8 10 8 11 8 8 10 10 15 15 13 9 7 10 6 6 8 8 8 9 11 14 15 16 26 26 12 10 10 10 8 7 7 8 11 12 13 10 10 10 15 10 10 10 8 8 8 6 6 8 8 8 8 8 8 8 10 8 8 8 8 8 6 6 6 8 8 8 8 10 11 12 11 15 13 18 9 9 11 11 12 12 19 14 9 11 9 12 10 9 8 13 10 9 9 8 8 6 6 8 10 10 12 12 8 8 8 8 8 9 9 9 9 10 9 9 10 10 10 10 10 8 8 8 8 8 8 10 12 11 12 11 13 8 8 6 8 6 8 9 9 12 17 12 8 9 8 8 8 13 11 9 9 9 12 9 9 10 10 10 13 9 8 8 8 8 10 8 8 8 8 8 10 8 6 8 8 8 9 11 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 12 14 21 14 14 10 12 8 8 8 15 19 8 8 8 10 11 3 0	Open. Hide. 0 3 6 6 7 7 9 9 9 7 7 3 0 0 0 3 21 21 9 9 9 12 11 7 8 8 9 9 8 8 9 13 13 8 8 8 8 8 20 15 18 11 8 6 6 6 6 6 6 9 11 9 6 6 6 7 6 6 6 8 8 10 15 15 6 6 8 17 10 12 10 13 8 8 8 10 10 10 10 10 9 8 8 6 6 6 6 10 8 6 6 6 6 6 6 13 13 10 10 10 15 11 9 8 8 6 6 6 6 10 8 13 11 3 0 3 12 7 7 7 12 8 8 3 0 0 3 0 3 8 11 11 10 8 12 8 8 10 8 6 6 8 3 0 0 3 9 9 15 11 15 9 9 9 6 8 8 13 12 11 9 9 8 6 6 6 6 6 3 0 3 11 7 7 7 8 8 12 19 24 26 26 12 14 11 10 10 10 16 9 6 6 6 6 7 3 0 3 8 8 8 8 8 3 0 0 3 12 18 16 10 10 10 10 17 13 11 11 10 12 10 11 11 11 12 6 6 6 6 6 6 6 3 0 0 0 3 6 6 6 6 6 6 6 8 6 6 6 6 6 8 8 8 16 8 8 8 9 8 8 6 8 6 6 6 7 14 12 12 6 6 6 6 6 6 9 9 12 10 8 6 6 8 8 13 16 16 14 10 10 10 13 28 7 7 6 6 6 6 6 6 6 6 9 10 10 13 18 18 11 10 10 10 9 9 9 15 16 20 23 15 21 21 27 25 29 28 16 14 17 13 19 21 19 9 6 6 6 10 8 9 9 13 10 3 0 3 8 10 8 8 8 10 12 15 24 16 18 7 7 6 6 6 6 11 11 12 13 12 7 6 6 6 7 8 15 15 15 13 10 12 12 9 8 8 8 11 14 19 37 18 19 11 6 3 0 3 8 9 10 10 10 10 10 10 11 11 17 18 22 9 9 8 9 7 7 8 7 13 7 9 9 9 8 13 3 0 0 3 13 12 28 37 37 30 24 19 10 9 6 6 6 6 11 11 12 9 9 9 16 15 6 6 6 6 6 8 8 10 10 11 10 9 9 10 11 9 9 10 10 10 10 10 10 11 14 19 11 8 8 8 8 11 19 26 24 21 21 21 21 18 17 17 9 9 9 9 9 9 9 9 9 21 16 24 30 24 21 19 15 8 10 8 10 10 16 13 13 10 10 10 10 21 21 19 19 19 17 11 9 8 10 13 3 0 0 0 0 0 3 10 10 9 9 10 11 15 8 8 6 6 8 8 6 6 6 17 19 27 21 16 11 9 3 0 0 3 6 6 8 8 6 6 8 15 15 17 17 17 24 19 18 3 0 0 3 17 11 6 7 7 9 9 10 10 11 10 8 8 6 6 6 6 8 10 12 16 9 9 7 15 7 7 7 6 6 6 15 23 27 22 16 19 12 12 9 9 10 10 10 16 14 21 9 9 9 10 12 10 3 0 3 8 8 10 8 8 8 8 8 10 3 0 3 10 11 11 22 23 10 10 10 13 16 21 27 12 10 10 9 9 10 12 11 10 8 8 6 6 6 13 15 17 18 3 0 0 3 8 8 19 15 7 13 6 6 6 15 12 15 10 10 10 18 11 10 9 9 10 15 15 22 12 15 12 8 8 12 15 13 17 10 17 15 23 11 12 9 3 0 3 17 9 7 10 6 6 6 15 17 12 12 12 12 12 9 8 7 6 8 8 8 8 8 15 22 28 29 16 13 10 10 9 10 10 9 15 13 13 10 11 13 23 23 25 19 19 11 11 9 9 8 8 8 12 14 10 10 15 12 15 12 12 11 12 10 10 10 10 12 8 8 8 8 8 8 8 8 8 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no469_n17.b1 MSMg01no469_n17.b1 CHROMAT_FILE:
MSMg01no469_n17.b1 PHD_FILE: MSMg01no469_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:34 2005
         (147 letters)



>mm_chr12_88192029_88192575
          Length = 547

 Score =  265 bits (137), Expect = 8e-76
 Identities = 140/141 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agacctaaagggcctttctgtgaatgcaaggttactcagagagtcaagttccttgtcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agacctaaagggcctttctgtgaatgcaaggttactcagagagtcaagttccttgtcaag 282

                                                                       
Query: 61  aaggctagggggcttgctttatattccagggcaaatccatcaggctcaccggagatgagt 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aaggctagagggcttgctttatattccagggcaaatccatcaggctcaccggagatgagt 222

                                
Query: 121 tgagctgtgacggggggtggg 141
           |||||||||||||||||||||
Sbjct: 221 tgagctgtgacggggggtggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 547
Length adjustment: 8
Effective length of query: 139
Effective length of database: 539
Effective search space:    74921
Effective search space used:    74921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information