Query= MSMg01no470_i24.b1 MSMg01no470_i24.b1 CHROMAT_FILE:
MSMg01no470_i24.b1 PHD_FILE: MSMg01no470_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:31 2005
(363 letters)
>mm_chr12_9553650_9554412
Length = 763
Score = 617 bits (319), Expect = 0.0
Identities = 350/363 (96%), Gaps = 5/363 (1%)
Strand = Plus / Plus
Query: 1 aatagtgctttttcctctgatttctttgtgcctgagtcactgctgcaaggtgttgaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagtgctttttcctctgatttctttgtgcctgagtcactgctgcaaggtgttgaacac 260
Query: 61 tgtggagaagagtcttcccctcacttaatccttccgttgatgcttctggagatgtctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggagaagagtcttcccctcacttaatccttccgttgatgcttctggagatgtctttg 320
Query: 121 ttttgttttgttttgttttgttttttgttttattaaattatttcatatgtttgctttcca 180
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 321 ttttgttttgttttgtttt-----ttgttttattaaattatttcatatgtttgcattcca 375
Query: 181 aatgttgctacccttcccagtcaccctcccagagttctttaccccatcccctctcccctt 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatgttgctacccttcccagtccccctcccagagttctttaccccatcccctctcccctt 435
Query: 241 ttttttgtagagggtgctaccccacccacctgcctaccctctccccatcttatcccctca 300
| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 436 tgccttggagagggtgctaccccacccacctgcctaccctccccccatcttatcccctca 495
Query: 301 gcatcccccttcgtggggcatcaagtttctactggattagctacatcctctcccactgaa 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 496 gcatcccccttcgtggggcatcaagtttctactggattaggtacatcctctcccactgaa 555
Query: 361 gcc 363
|||
Sbjct: 556 gcc 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no470_i24.g1 MSMg01no470_i24.g1 CHROMAT_FILE:
MSMg01no470_i24.g1 PHD_FILE: MSMg01no470_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:31 2005
(428 letters)
>mm_chr12_9692026_9692853
Length = 828
Score = 804 bits (416), Expect = 0.0
Identities = 425/428 (99%)
Strand = Plus / Minus
Query: 1 acctacagaagatcacaccacagggaagaggagtgaagctaaatttattaatatatctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 acctacagaagatcacaccacagggaagaggagtgaagctaaatttattaatatatctgg 569
Query: 61 atttactgaagccaaatcttacagcagagggttagcatcaagctaattagggaacagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atttactgaagccaaatcttacagcagagggttagcatcaagctaattagggaacagggg 509
Query: 121 aattcgggtttgagactccaatctctggcagcctctgggcaggtgtcactttgagcctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aattcgggtttgagactccaatctctggcagcctctgggcaggtgtcactttgagcctcc 449
Query: 181 acagatctctgtgagagccccttccctgacagccagaaagctaagcttatctgtggtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acagatctctgtgagagccccttccctgacagccagaaagctaagcttatctgtggtatt 389
Query: 241 taaaggtccaagattttgggcaaagtttcatcatagatatggagaatactgtctgcttct 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 taaaggtccaagaaattgggcaaagtttcatcatagatatggagaatactgtctgcttct 329
Query: 301 gtcaaatttcaaaatcttgtacttgttctatttccacaatttaaaaatccagtctctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtcaaatttcaaaatcttgtacttgttctatttccacaatttaaaaatccagtctctaaa 269
Query: 361 cccaccaggaaattccctcttgtcactgaaatgatccagggaaatcctggagagatcaaa 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cccaacaggaaattccctcttgtcactgaaatgatccagggaaatcctggagagatcaaa 209
Query: 421 catggcag 428
||||||||
Sbjct: 208 catggcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
