Query= MSMg01no471_l02.b1 MSMg01no471_l02.b1 CHROMAT_FILE:
MSMg01no471_l02.b1 PHD_FILE: MSMg01no471_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:02 2005
(649 letters)
>mm_chr12_113935894_113936942
Length = 1049
Score = 1236 bits (639), Expect = 0.0
Identities = 645/647 (99%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctta-ggttctctattcctgcacaaaaactcatgacctagaagcaagctgggg 62
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttagggtt-tctattcctgcacaaaaactcatgacctagaagcaagctgggg 262
Query: 63 aggaaagggtttattcagcttacactttccacactgttgttcatcaccaaagaagtcagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aggaaagggtttattcagcttacactttccacactgttgttcatcaccaaagaagtcagg 322
Query: 123 actggaactcaagcagatcaggaagcaggagctgatgctgaggccatgaagggatgtttc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actggaactcaagcagatcaggaagcaggagctgatgctgaggccatgaagggatgtttc 382
Query: 183 ttactggcttgtttgcttcccctggctttctcaacttgctttcttatagaacccaggacc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttactggcttgtttgcttcccctggctttctcaacttgctttcttatagaacccaggacc 442
Query: 243 accagcccagggatggcaccacccacaatgagccctccccccttgatcactaattgagaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 accagcccagggatggcaccacccacaatgagccctccccccttgatcactaattgagaa 502
Query: 303 aatgccttacagctggatctcatggaggcatttcctcaagggaggctcctttctctgtga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatgccttacagctggatctcatggaggcatttcctcaagggaggctcctttctctgtga 562
Query: 363 taactccagcctgtgtcaagttgacacaaaactagccagtacaaggagcctgacagaatt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 taactccagcctgtgtcaagttgacacaaaactagccagtacaaggagcctgacagaatt 622
Query: 423 agttcccacggctgtttccagaaaggtcactgatagatacaatgaggttgagaggagtgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agttcccacggctgtttccagaaaggtcactgatagatacaatgaggttgagaggagtgc 682
Query: 483 cgagctcacaaggctaatcgccatgggtgaccgtaagcttagcagccatgagtcccagcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cgagctcacaaggctaatcgccatgggtgaccgtaagcttagcagccatgagtcccagcc 742
Query: 543 tgaagagcaagggaaaggcgggtcagggagactatgccaccagcactgtgtcccgtccag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgaagagcaagggaaaggcgggtcagggagactatgccaccagcactgtgtcccgtccag 802
Query: 603 tgtcctgctcagcacacctcacctctcatagctcagtccattcggtc 649
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgtcctgctcagcacacctcacctctcatagctcagtccattcggtc 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_l02.g1 MSMg01no471_l02.g1 CHROMAT_FILE:
MSMg01no471_l02.g1 PHD_FILE: MSMg01no471_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:02 2005
(556 letters)
>mm_chr12_114118186_114119141
Length = 956
Score = 1075 bits (556), Expect = 0.0
Identities = 556/556 (100%)
Strand = Plus / Minus
Query: 1 cagtgtgaagcagaccctgggagggcaccgtggtgtagggtggtgtcaatagtgaggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 cagtgtgaagcagaccctgggagggcaccgtggtgtagggtggtgtcaatagtgaggctg 697
Query: 61 gctccaaagctgaggtggcattgaaaacaatactcagcaacaggatgcaggagagctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gctccaaagctgaggtggcattgaaaacaatactcagcaacaggatgcaggagagctgag 637
Query: 121 tggaagcctagaatccatcagcgtgggatggtggcagatagggctgggccatgtgctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tggaagcctagaatccatcagcgtgggatggtggcagatagggctgggccatgtgctcag 577
Query: 181 tgggcaaatcgctaggaggctgatgtgatggggaagggaagggagacagctctagcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgggcaaatcgctaggaggctgatgtgatggggaagggaagggagacagctctagcttgc 517
Query: 241 cgtctgggagggatgcctcagatggggaggactgggagatgtggggaagaaacaaagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cgtctgggagggatgcctcagatggggaggactgggagatgtggggaagaaacaaagcca 457
Query: 301 cctggagactcactggtcagaggaggcagggctggtgattcaggtgtaaacactgttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cctggagactcactggtcagaggaggcagggctggtgattcaggtgtaaacactgttagc 397
Query: 361 accaaggtaggggccagagccaaggcctagcagggcctctaggggaggtgactggagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 accaaggtaggggccagagccaaggcctagcagggcctctaggggaggtgactggagaga 337
Query: 421 aaattggtacaggaagaggggatggtctgaggacagagggtaaggaagattctccggaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aaattggtacaggaagaggggatggtctgaggacagagggtaaggaagattctccggaag 277
Query: 481 gccacggaaacatggatggggactgtgctcacatagggccagctggatggagagaggccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gccacggaaacatggatggggactgtgctcacatagggccagctggatggagagaggccc 217
Query: 541 aaggtaggtggaggag 556
||||||||||||||||
Sbjct: 216 aaggtaggtggaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
