Query= MSMg01no472_f11.b1 MSMg01no472_f11.b1 CHROMAT_FILE:
MSMg01no472_f11.b1 PHD_FILE: MSMg01no472_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:57 2005
(482 letters)
>mm_chr12_96075118_96075999
Length = 882
Score = 845 bits (437), Expect = 0.0
Identities = 468/481 (97%), Gaps = 6/481 (1%)
Strand = Plus / Plus
Query: 5 gaattcccat---ttccttatcatattgaggagtcagcaaaggatggttagcagaacaac 61
|||||||||| | |||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcccataggt---ttatcatattaaggagtcagcaaaggacggttagcagaacaac 261
Query: 62 aatgaacagtgatatattgtgattaacaaataaaggttgaaatattgcctctgcattctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatgaacagtgatatattgtgattaacaaataaaggttgaaatattgcctctgcattctt 321
Query: 122 cattctcagtcttccactttccatcctgaaatagttgttcttgtagattttatttggttc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cattctcagtcttccactttccatcctgaaatagttgttcttgtagattttatttggttc 381
Query: 182 cctgaaacaacttatgctttgcccttaggtaagcagagataagtgagaagaggcttgtgg 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 382 cctgaaacaacttatgctttgcccttaggtaagcagagataagtgagaagaggcttgttg 441
Query: 242 gaatgttaatatgcagttggattgatatttgcgttatgtatccatgagcacagtcattca 301
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 442 gaatgttaatatgcagttggattgatattcgcgttatgtatccatgagcacagtcattca 501
Query: 302 gagcctgatttattattacaggatatatttatgaggttagggtaataaaaacatcctaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gagcctgatttattattacaggatatatttatgaggttagggtaataaaaacatcctaaa 561
Query: 362 atttataaatattagtgtggtaagaccatattgataggatctctttcatgtgaaattata 421
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 562 atttataaatattagtgtggtaagaccatattgataggatctgtttcatgtgaaattgca 621
Query: 422 gtattatttctttgatcatatttcttgaacatattttatgatttgaattaactttctctt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtattatttctttgatcatatttcttgaacatattttatgatttgaattaactttctctt 681
Query: 482 g 482
|
Sbjct: 682 g 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_f11.g1 MSMg01no472_f11.g1 CHROMAT_FILE:
MSMg01no472_f11.g1 PHD_FILE: MSMg01no472_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:57 2005
(488 letters)
>mm_chr12_96243093_96243980
Length = 888
Score = 598 bits (309), Expect = e-175
Identities = 348/361 (96%)
Strand = Plus / Minus
Query: 1 tggtatacctgtgtgcttcttcagtggaaggtgtagggcacagtttcaatttttcaaaat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtatacctgtgtgcttcttcaggggaaggtgtagggcacagtttcaatttttcaaaat 302
Query: 61 atgtgctgtatttgcattgatttaccttcaatcactcagcagaagtcttaaaaaaggtct 120
|||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 atgtgctggatttgcatagatttaccttcaatcactcagcagaagtcttaaaaagggtct 242
Query: 121 ctattcctttcttttaaccaatgcttaaaaactgtgtactgcatctttcaggaaggacaa 180
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 241 ctattcctttcttttaaccaatgtttaaaagctgtgtactgcatctttcaggaaggacac 182
Query: 181 attgtaggtcaaaggttatggggatggtttagggtcacattccctctactggaagtctta 240
|||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 181 attgtaggtcaaagcttatggggatggtttagggtcccagtccctctactggaagtctta 122
Query: 241 cttggctacaggagatggctggcttaaacacagtatcttccaatgttagaaatcatagcc 300
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 cctggctacaggagatggctggcttaaacatagtatcttccaatgttagaaatcatagcc 62
Query: 301 agggtcacccttacagatttctgggagtttctgttgagctgggtttctaccttgcctcct 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggggcacccttacagatttctgggagtttctgttgagctgggtttctaccttgcctcct 2
Query: 361 a 361
|
Sbjct: 1 a 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
