Query= MSMg01no472_g03.b1 MSMg01no472_g03.b1 CHROMAT_FILE:
MSMg01no472_g03.b1 PHD_FILE: MSMg01no472_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:00 2005
(497 letters)
>mm_chr12_111173133_111174028
Length = 896
Score = 661 bits (342), Expect = 0.0
Identities = 369/378 (97%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 120 atctggaagcaggcaagggtgcccacccacctgccttctatccatcaaagcactaggaat 179
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 896 atctggaagcaggcaagggcgcccacccacctgccttctttccatcaaagcactaggaat 837
Query: 180 ccaggcaagaaagaagaaggtagggctgaaggcccaagaccccaggggtcagaggagtgg 239
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 836 ccaggcaagaaagaagaaagtagagctgaaggcccaagaccccaggggtcagaggagtgg 777
Query: 240 catgcctaggccaaaggctggagagtctgatgtcctggctatgagtagaaggttggccta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 catgcctaggccaaaggctggagagtctgatgtcctggctatgagtagaaggttggccta 717
Query: 300 gcttcagaagagacagactgaacctctgtaaccagggaactggtttctcaaatcagtctc 359
||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 716 gcttcagaagagacaaactcaacctctgtaaccggggaactggtttctcaaatcagtctc 657
Query: 360 ctctctggcctttaattctatctgttgagtcatctttattgttctgcatctgccttcttt 419
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 656 ctctccggcctttaattctatctgttgagtcatcttta-tgttctgcatctgccttcttt 598
Query: 420 cactctaccctgctcactaggcttacccacgttgaccactttgttttatttctgctcccg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cactctaccctgctcactaggcttacccacgttgaccactttgttttatttctgctcccg 538
Query: 480 gccaattagatgctactg 497
||||||||||||||||||
Sbjct: 537 gccaattagatgctactg 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 896
Length adjustment: 10
Effective length of query: 487
Effective length of database: 886
Effective search space: 431482
Effective search space used: 431482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_g03.g1 MSMg01no472_g03.g1 CHROMAT_FILE:
MSMg01no472_g03.g1 PHD_FILE: MSMg01no472_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:00 2005
(469 letters)
>mm_chr12_111005602_111006466
Length = 865
Score = 833 bits (431), Expect = 0.0
Identities = 458/473 (96%), Gaps = 12/473 (2%)
Strand = Plus / Plus
Query: 1 tttgggatttcatctagataagttcactctttttttttttttaaagtatcgatactgtcc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tttgggatttcatctagataagttcactctttttttta----aaagtatcgatactgtcc 256
Query: 61 gtttacttaactaagaattgtgatacatctgtcttggaagatgtgaggatagtaggactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtttacttaactaagaattgtgatacatctgtcttggaagatgtgaggatagtaggactg 316
Query: 121 atggtataaaatacagacctaggggctggagtaatggctcagcaggttccagaggaccag 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atggcataaaatacagacctaggggctggagtaatggctcagcaggttccagaggaccag 376
Query: 181 ggctcaatttctaacacccacacggcaacccacaacggcctctaattcctggttcagggg 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggctcaatttctaacacccatacggcaacccacaacggcctctaattcctggttcagggg 436
Query: 241 atctgatttgc----tcacacagacatccttgtggtcaaaacaccaatgaacataaaata 296
|||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atctga----cacgatcacacagacatccttgtggtcaaaacaccaatgaacataaaata 492
Query: 297 aaataaaaatgaatgaattaatttaaaaagatacaactccttatttaccacaataggaca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaataaaaatgaatgaattaatttaaaaagatacaactccttatttaccacaataggaca 552
Query: 357 ttagtactaatggatattgagaaataagatggaatacacatcccttatttggaaatatgg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttagtactaatggatattgagaaataagatggaatacacatcccttatttggaaatatgg 612
Query: 417 tggtaaatgccagggggaaacaatgctacaagttgcaagtttttgttagtttt 469
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggtaaatgccagggggaaacaatgctacaagttgcaagtttttgttagtttt 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 865
Length adjustment: 10
Effective length of query: 459
Effective length of database: 855
Effective search space: 392445
Effective search space used: 392445
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
