NTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTTACCTCTGAGCGCCATTTTTTAATGGGGATATTTGAT
TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCC
GCTATCTGATTTGGTATAGGTAAAGATCCTTTCCCAATCGTCTTATTGAC
GGTGTCTTTTGCCTTACAGAACCTTTACAATTTTATGAGGTCCCACTTGT
TGATTCTCAATCTTATAGCACAAGACATTGCTGTTCTATTCAGGAATTTT
TCTCCTGTGCCCATATTTTCTTAGGCTTTCCCACACTTTCTCCTCTATAA
GTTTCAGTGTCTCTGGTTTTATGTGCAGTTCCTTGATCCACTTAGATTTG
ACCTTAGTACAAGGAGATAGGAATGGATCAATTTGCAGTCTTCTACATGA
TAACTTCCAGTTGTGCCAGCACCATTTGTTGAAAATACTGTCTTTTTTCC
ACTGTATGGTTTTAGCTCCCTTGATAAAGATCAAGTAACCTTAGGGGTGT
GGGGTCATTTGTGGGTCCTCCATTTTATTTCCTTGGATCACTTGTCTGGC
TTCTTACTCGTATTATTGTTGGTTTTTAACACAATTGCGTCGGGAGTATA
GTTTTTTTCCCGGGTGTGTGGGGTTTCCCCAACAGTTCTTTTTTCTCTTT
TAAAAGCTTCCTGCTCTTCTATTTTTTTCTCTTTTCCCCTTGTCTTTATT
TCCTACCCCG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTAATTCATTTATATGGTATT
TTTTTAACTATTCTATATATGTTCAATGCATTTTGTTCTGTTTATCTTTG
ACTTAAGTCTTTTTTTTTTTTTTTTGAGGATAGCAAAGATTTATGAGAAA
GTCGTGTGAATAGCAAAACACACAGGTTCTTGTAAATTAAAGGTAAACAT
TTGATTTATTCTTTTTATATTCATAAGTGTGCTACAAAAATCTCTTTCCT
GAAGAAATCATCTTGGATTATTTTTAAACTTTGAGAATACTATTTGCATA
GATTATTTGTCTGGTAGTGAGAAAATGCCTGACTAAAAAAAAACTTATGG
AAGAAAGGGAAGTTTGACTCACAGTTTCTGGTGGTTTGAATGAAAAATAT
CCATAGGCCTCAGTATTTGAACTCTTGATCCTCAGTTATTTTGCTGTTTG
GGGAAGTTTAAAAAGCACCATTGCTGGAGGATATACCTCACCCCTAACAA
GCTATGAGAATTGAAAGCAACTTGCTCACTTTCAGTGCCCACCTTTTGCA
TCATGTGCTCCCATTTGGACTCCTCCTTCCCATATTTTCTCATGTGGCCC
TCCACTCCACCTTATTTTTTTCTTCCACTCTTCCACCCAACTTCTCTTTT
TAGTTTCCCTGTTTATTTTACCGACTCTCATAAAATCCACTCCCTTCTAT
CCCCCTGTTTCTCTTG

Query= MSMg01no472_j15.g1 MSMg01no472_j15.g1 CHROMAT_FILE:
MSMg01no472_j15.g1 PHD_FILE: MSMg01no472_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:17 2005
         (428 letters)



>mm_chr12_49273992_49274818
          Length = 827

 Score =  712 bits (368), Expect = 0.0
 Identities = 409/428 (95%), Gaps = 10/428 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttaattcatttatatggtatttttttaactattctatatatgttcaatgcattttgtt 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaatttatttatatggtatttttttaactattctatatatgttcaatgcattttgtt 260

                                                                       
Query: 61  ctgtttatctttgacttaagtcttttttttttttttttgaggatagcaaagatttatgag 120
           |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ctgtttatctttgacttaagtc-tttttttttttttttgaggataacaaagatttatgag 319

                                                                       
Query: 121 aaagtcgtgtgaatagcaaaacacacaggttcttgtaaattaaaggtaaacatttgattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagtcgtgtgaatagcaaaacacacaggttcttgtaaattaaaggtaaacatttgattt 379

                                                                       
Query: 181 attctttttatattcataagtgtgctacaaaaatctctttcctgaagaaatcatcttgga 240
           ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 380 attctttttatattcataagtgtgctacaaaaatctccttcctgaacaaatcatcttgga 439

                                                                       
Query: 241 ttatttttaaactttgagaatactatttgcatagattatttgtctggtagtgagaaaatg 300
           ||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttactcagaaactttgagaatactatttgcatagattatttgtctggtagtgagaaaatg 499

                                                                       
Query: 301 cctgactaaaaaaaaacttatggaagaaagggaagtttgactcacagtttctggtggttt 360
           ||||||||||||||||||||||||||||||         |||||||||||||||||||||
Sbjct: 500 cctgactaaaaaaaaacttatggaagaaag---------actcacagtttctggtggttt 550

                                                                       
Query: 361 gaatgaaaaatatccataggcctcagtatttgaactcttgatcctcagttattttgctgt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 551 gaatgaaaaatatccataggcctcagtatttgaactcttgatcctcagttattttgctat 610

                   
Query: 421 ttggggaa 428
           ||||||||
Sbjct: 611 ttggggaa 618


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space:   342742
Effective search space used:   342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)