Query= MSMg01no473_a20.b1 MSMg01no473_a20.b1 CHROMAT_FILE:
MSMg01no473_a20.b1 PHD_FILE: MSMg01no473_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:55 2005
(572 letters)
>mm_chr12_67898553_67899524
Length = 972
Score = 1091 bits (564), Expect = 0.0
Identities = 570/572 (99%)
Strand = Plus / Minus
Query: 1 gaatcatttgtaggcttattaaagcaaagccattaaataaaaaaaaaaactcttttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gaatcatttgtaggcttattaaagcaaagccattaaataaaaaaaaaaactcttttaaaa 713
Query: 61 accaggtgtataaaattatacataatctcaataagccattatggtaatatgcctacatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 accaggtgtataaaattatacataatctcaataagccattatggtaatatgcctacatta 653
Query: 121 tctaaaccaacaagaaatttctaaataaaataatgaagcttgtccaaaatgaaatgagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tctaaaccaacaagaaatttctaaataaaataatgaagcttgtccaaaatgaaatgagag 593
Query: 181 tctatttcttctaaataataaaaagtacttaccaaagttcagaaatgtatgagaaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tctatttcttctaaataataaaaagtacttaccaaagttcagaaatgtatgagaaaaatt 533
Query: 241 gtgatgcgcagtagacacagaaactgaatcatgtttctactatgttttgccttcaacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gtgatgcgcagtagacacagaaactgaatcatgtttctactatgttttgccttcaacctg 473
Query: 301 attggactattgacaaatttcatgcagctgaatccaaatgatgtgtactctaaagcgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 attggactattgacaaatttcatgcagctgaatccaaatgatgtgtactctaaagcgaag 413
Query: 361 acattggtgcttgcaattttgggattcaatttggtacatatattttaattctccacaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 acattggtgcttgcaattttgggattcaatttggtacatatattttaattctccacaaac 353
Query: 421 gtgatggaaaagggccacagtggctctacggggcatctcttcagatgactaactgctgct 480
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 352 atgatggaaaagggccacagtggctctacagggcatctcttcagatgactaactgctgct 293
Query: 481 tgattgtctgtggaaaaccaacctaaagtaacaatctttgttggtgcttgctcagatcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgattgtctgtggaaaaccaacctaaagtaacaatctttgttggtgcttgctcagatcag 233
Query: 541 gtggaccaaaacagcaggaagcgcctctgaca 572
||||||||||||||||||||||||||||||||
Sbjct: 232 gtggaccaaaacagcaggaagcgcctctgaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_a20.g1 MSMg01no473_a20.g1 CHROMAT_FILE:
MSMg01no473_a20.g1 PHD_FILE: MSMg01no473_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:55 2005
(507 letters)
>mm_chr12_67720774_67721681
Length = 908
Score = 913 bits (472), Expect = 0.0
Identities = 499/508 (98%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 1 ctagaagagaaaaaaaa-taactcaggagaattactataagttttattttagttatatca 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagaagagaaaaaaaaataactcaggagaattactataagttttattttagttatatca 260
Query: 60 gatcttagaattcatcaggaaactcacttgacattttgcagaagccagcagaatatctca 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcttagaattcatcaggaaactcgcttgacattttgcagaagccagcagaatatctca 320
Query: 120 catacagattttggggaagatctgcacagggctgataagcctttacattgccaagtaaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catacagattttggggaagatctgcacagggctgataagcctttacattgccaagtaaga 380
Query: 180 gagcatggaacaggagacagtaggaacaaaatgtgatttggagataggaggaataaatag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcatggaacaggagacagtaggaacaaaatgtgatttggagataggaggaataaatag 440
Query: 240 caacccaaacatgactatgggattaaaatagaatcggtatatcctctgctgtcataaaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacccaaacatgactatgggattaaaatagaatcggtatatcctctgctgtcataaaag 500
Query: 300 acaagggagaaagactgaattagccagaatgagaattcattcaacaaacatgtccttcaa 359
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 501 acaagggagaaagactgaattagctggaatgagaagtcattcaacaaacatgtccttcaa 560
Query: 360 gtggaactaaaacttattcggatgcaaagagatggatcgatagttagggggactagatat 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 gtggaactaaaacttattcggatgcaaagagatggatcaatagttagggggactagatat 620
Query: 420 attgcatatatagtcatatttatggtattataacatatacatcctaatttatgtacataa 479
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 attgcatatatagtcatttttatggtattataacatatgcatcctaatttatgtacataa 680
Query: 480 ggagttgattggttgatacgcttgaacc 507
|||||||||||||||||| |||||||||
Sbjct: 681 ggagttgattggttgatatgcttgaacc 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space: 446306
Effective search space used: 446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
