Query= MSMg01no473_p23.b1 MSMg01no473_p23.b1 CHROMAT_FILE:
MSMg01no473_p23.b1 PHD_FILE: MSMg01no473_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:17 2005
(607 letters)
>mm_chr12_17669099_17670105
Length = 1007
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%)
Strand = Plus / Minus
Query: 10 ggaattcaggacttcctgcgtgcctagcaaacatcctagcaaaccaactttcattccttg 69
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggaattcaggacttcctgtgtgcctagcaaacatcctagcaaaccaactttcattccttg 417
Query: 70 taatggtttttgcttgcagacttcccgaaatggtcttagagagattccccagaggcgcta 129
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 taatggcttttgcttgcagacttcccgaaatggtcttagagagattccccagaggcgcta 357
Query: 130 tcgagctatactgggagaacagttgtatggaattatgtgatatatttgtgttgcctacaa 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcgagctatactgggagaacagttgtatggaattatgtgatatatttgtgttgcctacaa 297
Query: 190 agtgagtccctgactccctggctctaaggtgcatccttccatccctgcccaagacatagc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtgagtccctgactccctggctctaaggtgcatccttccatccctgcccaagacatagc 237
Query: 250 acagtatttgtgaaatctcgatgcatctttttagtttctatgtatgtgtgcccatttgtg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 acagtatttgtgaaatctcgatgcatctttttagtttctatgtatgtgtgcccatttgtg 177
Query: 310 ggcatgcatgcaagtgccaaaagagatcagaataggatgttggatcccctaggggtgagg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggcatgcatgcaagtgccaaaagagatcagaataggatgttggatcccctaggggtgagg 117
Query: 370 ttacaggcagctgtgaaccatgtgagtgctgggaactgaaggcaggtcctccggaagagc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ttacaggcagctgtgaaccatgtgagtgctgggaactgaaggcaggtcctccggaagagc 57
Query: 430 agtgtgtgctcttaaatactgagttacctccccagccccattttaaatgtaatttg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 agtgtgtgctcttaaatactgagttacctccccagccccattttaaatgtaatttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_p23.g1 MSMg01no473_p23.g1 CHROMAT_FILE:
MSMg01no473_p23.g1 PHD_FILE: MSMg01no473_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:17 2005
(555 letters)
>mm_chr12_17613289_17614244
Length = 956
Score = 572 bits (296), Expect = e-167
Identities = 344/360 (95%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 1 cacacccctaaaccccttaccccataaaaacccctagcttttgagcctcgtggccaatat 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 201 cacacccctaagtcccttaccccataaaaacccctagcttttgagcctcgtggccgacat 260
Query: 61 ccgttatctcctgtgtggcatgcatgtcggtccagagctccttcattaaacgacctcatg 120
| ||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct: 261 ctgttatctcctgtgtggcatgcatgtcggtccggagctccgtcattaaacaacctcatg 320
Query: 121 taattacatcagggtggtctattcatgattctttgggtgcacgccgaattgggaattgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattacatcagggtggtctattcatgattctttgggtgcacgccgaattgggaattgag 380
Query: 181 tgggggtttccccactaggttctatcactagttcctccgtcctctctgt-ctctttgctc 239
|||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 381 tgggggtttccccactaggttctatcactagttcctccatcctctcttttctctttgctc 440
Query: 240 aacaatggactttgatctgaaggtgtgtgttggggaaattctgggtttttactcctctag 299
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 aacaatagactttgatctgaaggtgtgtgttggggaaattctaggtttttactcctctag 500
Query: 300 ctttaacttctcagggagtaaagagggaagcaaggaacgggactaagacgtaccttcacc 359
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 501 ctttaacttctcagggagtaaagagggaagcaaggaacgtgactaagacaaaccttcacc 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space: 515570
Effective search space used: 515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
