Query= MSMg01no475_e16.b1 MSMg01no475_e16.b1 CHROMAT_FILE:
MSMg01no475_e16.b1 PHD_FILE: MSMg01no475_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:01 2005
(451 letters)
>mm_chr12_103011813_103012663
Length = 851
Score = 793 bits (410), Expect = 0.0
Identities = 446/468 (95%), Gaps = 17/468 (3%)
Strand = Plus / Plus
Query: 1 gaactgactcacacagtttgtactctgagctccatgccatagcatg-------------a 47
|||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 184 gaactgactcacacagtttgtactctgagctccatgccatagcatgactacctatacata 243
Query: 48 catacat----acacacacacacacacacacacacacacacacacacacacaagtgcata 103
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 catacatacacacacacacacacacacacacacacacacacacacacacacaagtgcata 303
Query: 104 tgcacataaacagacacatgcatacacatgtaaacacacacatacatgcctgcatgaact 163
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgcacatatacagacacatgcatacacatgtaaacacacacatacatgcctgcatgaact 363
Query: 164 taaacacacacatttaattaatgaatttaaaattttagatttaattttcacttaattcaa 223
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 364 taaacacacacatttaattaatgaatttaaatttttagatttaattttcacttaattcaa 423
Query: 224 ttaacttttactatatattttaaatggtcttgtctacataatatctgttttgagaactca 283
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 424 ttaacttttactatatattttaaatggacttgtctacataatatctgttttgagaaccca 483
Query: 284 gtgggtccatagatccctggaacatgaggactgttaaatcccagccaggcttcctcagcc 343
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtggatccatagatccctggaacatgaggactgttaaatcccagccaggcttcctcagcc 543
Query: 344 aactaactgacaggattttggaatgtggaattttaaagtggccatcaccctgcaaagcac 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aactaactgacaggattttggaatgtggaattttaaagtggccatcaccctgcaaagcac 603
Query: 404 tgtcagcttacacacctgctggaggagcccaaactgaaaacgttcagt 451
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tgtcagcttacacacctgctggaggagcccaaactgaaaacgttcagt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_e16.g1 MSMg01no475_e16.g1 CHROMAT_FILE:
MSMg01no475_e16.g1 PHD_FILE: MSMg01no475_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:01 2005
(388 letters)
>mm_chr12_103162154_103162941
Length = 788
Score = 696 bits (360), Expect = 0.0
Identities = 378/384 (98%)
Strand = Plus / Minus
Query: 5 ttgtcccacgtctgcctctgcagtgctgagactctggtcacccacagccacctgcatctc 64
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 711 ttgtcccacgtctgcctctggagtgctgagactctggtcacccgcagccacctgcatctc 652
Query: 65 acacattttagagcagaagaataactgaaatgtaaaagctcagtgaatggacttagcata 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acacattttagagcagaagagtaactgaaatgtaaaagctcagtgaatggacttagcata 592
Query: 125 gaaagctggtggactagatgacaggcatgtagaaatccttcccatcaacacggcaaactg 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaaagctggtagactagatgacaggcatgtagaaatccttcccatcaacacggcaaactg 532
Query: 185 accgtagccaatgagcagagcgctggaggcatctgacattattagctcagcctaactcac 244
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 actgtagccaatgagcagagcgctggaggcatctgacattattagctcagcctaactcac 472
Query: 245 aggagcctcctaactggaagcagaaggggtggtgaaaacatctgatgatcttttcatcgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aggagcctcctaactggaagcagaaggggtggtgaaaacatctgatgatcttttcatcgt 412
Query: 305 ctcagctgaacagaaactagaagcctgcaagtggaagaaattgagcgaacttcaaattta 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 411 ctcagctgaacagaaactagaagcctgcaagtggaagaaattgagtgaacttcaaattta 352
Query: 365 tgtaaacgaaaagaaatacttact 388
||||||||||||||||||||||||
Sbjct: 351 tgtaaacgaaaagaaatacttact 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
