TCTATXXXXXXXXXXXXXXXXXXXXXXXXXATACGAAACAGGATCCGCGG
AATTCCATATATCGGAAGTGAATTGAGTGAATCAAGAAAAAAGGAAAAAG
AAAAATATATTCTCATTTTCTATGAATCAAATTAGTTGCAAGGGAGACAA
TTTAATTTCTTTTCTGATGGGATTATGATTCATGAATTAAGGCTTTAAAT
CTATTATATTATCTGTGCCTGTTCAGGGGGAACATTTGCCCTCTTATTCG
ATGTCTAGGTGTAGAATTCTTCAAGTGTCCTGAAACCCTTAGCACTGGTG
TCATTGCATGAACATTTTATATATCTTCAAATCCAGAAAGTTTTTGAGAA
GATAGGAACTTTGAGGAAAAGAAAATGATCCTGAAAAACTGGAGCTTTTG
ATCATCTTTTCTGTGAATCAAATATTCATAAGTAAATGTCAGCACCCATG
TAGCATTGGTGATCTTTGTCTACTCCTGGATAATGAGTGAGGAATTTGAT
GCCTACCAAAGATACATTGCAGACAAAGCTGAATACAGGCTGGATGAAAT
AGCATATACTCACCAGCTGTTTTCACATTTTTTCATATTTTCTATGTGTT
TTTACTTCAACTCTTTTTTTCACCTTCAAAGACACTGTCTTATCCTTCTC
TTGTGGAGTTGCTTCATTCTGAAAAGTTCACCTATACAGCCAAAGGGGCA
GGTCTACAGGTTTTCTCCCATAGCCTCTAACTGATTAGCTCTTGN

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA
AACAAAAGAGCATTTTATTTTAAATTATAATGCCATTAATTCTCATATAA
ACAGCAATTCAAACATTAGATACAAAGTTAAAATGTATATTATTGAAAAA
ATAAATTATTTTTATTAGTTATAAACCTAGTTTCATCAGATATAGAATAG
TAAAATTAAATAACTATGTTATTGAAAATTGGGAAACAAAAATATAATAC
TGACATGAAAATACATAAACTCATAAGGTGAATATAGCAACACAAGATAA
AGTAAAATTGTTAATAGGAAAAAGTAACAGAGGAAACGGACAAATTTAGA
TATTACTGGAAATATTTCTTCAATGAGAGATGACACAGCCAAATATGAAA
TTAAAATTTTATTATATTATCAACTCAATTGAGGTCAACCTCATTATGGC
TCTTGTCTATGAATTCAGCTATTAATCAGTAAAATAAACAAAATATATAA
ACTGCAAATATCATTTATTTGGAATGGACTTAAATAAGGTATTCTGAACC
TTATCTCTTCTGTGAAATATCAAGTATAAGACTTGCGTTTGATTGACTCT
CTCTTTCCGGTCCAGTGACCCTGCCCGCACCTAGCCTAGCAGTGAT

Query= MSMg01no476_l11.b1 MSMg01no476_l11.b1 CHROMAT_FILE:
MSMg01no476_l11.b1 PHD_FILE: MSMg01no476_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:54 2005
         (556 letters)



>mm_chr12_97762923_97763878
          Length = 956

 Score = 1044 bits (540), Expect = 0.0
 Identities = 552/556 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaattgagtgaatcaagaaaaaaggaaaaagaaaaatatattctcattttctatgaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tgaattgagtgaatcaagaaaaaaggaaaaagaaaaatatattctcattttgtatgaatc 260

                                                                       
Query: 61  aaattagttgcaagggagacaatttaatttcttttctgatgggattatgattcatgaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattagttgcaagggagacaatttaatttcttttctgatgggattatgattcatgaatt 320

                                                                       
Query: 121 aaggctttaaatctattatattatctgtgcctgttcagggggaacatttgccctcttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggctttaaatctattatattatctgtgcctgttcagggggaacatttgccctcttatt 380

                                                                       
Query: 181 cgatgtctaggtgtagaattcttcaagtgtcctgaaacccttagcactggtgtcattgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgatgtctaggtgtagaattcttcaagtgtcctgaaacccttagcactggtgtcattgca 440

                                                                       
Query: 241 tgaacattttatatatcttcaaatccagaaagtttttgagaagataggaactttgaggaa 300
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaacatagtatatatcttcaaatccagaaagtttttgagaagataggaactttgaggaa 500

                                                                       
Query: 301 aagaaaatgatcctgaaaaactggagcttttgatcatcttttctgtgaatcaaatattca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagaaaatgatcctgaaaaactggagcttttgatcatcttttctgtgaatcaaatattca 560

                                                                       
Query: 361 taagtaaatgtcagcacccatgtagcattggtgatctttgtctactcctggataatgagt 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 taagtaaatgtcagcacccatgtagcatcggtgatctttgtctactcctggataatgagt 620

                                                                       
Query: 421 gaggaatttgatgcctaccaaagatacattgcagacaaagctgaatacaggctggatgaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaggaatttgatgcctaccaaagatacattgcagacaaagctgaatacaggctggatgaa 680

                                                                       
Query: 481 atagcatatactcaccagctgttttcacattttttcatattttctatgtgtttttacttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagcatatactcaccagctgttttcacattttttcatattttctatgtgtttttacttc 740

                           
Query: 541 aactctttttttcacc 556
           ||||||||||||||||
Sbjct: 741 aactctttttttcacc 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no476_l11.g1 MSMg01no476_l11.g1 CHROMAT_FILE:
MSMg01no476_l11.g1 PHD_FILE: MSMg01no476_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:54 2005
         (326 letters)



>mm_chr12_97877140_97877865
          Length = 726

 Score =  615 bits (318), Expect = e-180
 Identities = 324/326 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaaaattgggaaacaaaaatataatactgacatgaaaatacataaactcataaggtgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaaaattgggaaacaaaaatataatactgacatgaaaatacataaactcataaggtgaat 315

                                                                       
Query: 61  atagcaacacaagataaagtaaaattgttaataggaaaaagtaacagaggaaacggacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atagcaacacaagataaagtaaaattgttaataggaaaaagtaacagaggaaacggacaa 255

                                                                       
Query: 121 atttagatattactggaaatatttcttcaatgagagatgacacagccaaatatgaaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atttagatattactggaaatatttcttcaatgagagatgacacagccaaatatgaaatta 195

                                                                       
Query: 181 aaattttattatattatcaactcaattgaggtcaacctcattatggctcttgtctatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaattttattatattatcaactcaattgaggtcaacctcattatggctcttgtctatgaa 135

                                                                       
Query: 241 ttcagctattaatcagtaaaataaacaaaatatataaactgcaaatatcatttatttgga 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttcagctatttatcagtaaaataaacaaaatatataaactgcaaatatcatttatttgga 75

                                     
Query: 301 atggacttaaataaggtattctgaac 326
           |||||||||||||||| |||||||||
Sbjct: 74  atggacttaaataaggcattctgaac 49


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space:   227289
Effective search space used:   227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)