GATTTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACTTTATATAATTCTGTCTCCTCTATGAATAAAAGTTTTAAG
TCATTTATGTGTTTTACACTATTCCTAAAAGTCTGCCACAAACAGAGATA
GATGTATTTCAGAACCAAAAAGAAAGTCCTGAAGTTTTTCCTCCTAAGTT
TAGCAATGGCAATTGAAAAAATTATTTTACTATTTTTTAATATTATGTGT
ATGTGTGTATATATGTGTCTGTGAATACATGTTCTCACAAAGTTCAGATG
AGGGATTTGGATTCCCTGTAATTGTAGTTACAAGCCATTTTGCAATAATT
AGGTGGTTTCTGACAGCTAAATGTGCAAAAATAATAGTGCTCTAAACTCA
TCAGCCAACTTTTCAGCCCTTGTTTATTACATTTCAATGATTCATAAAAT
CATTGAGAGCATTGTAACTTTTATAAGACCAACTACTAAAAATTATGAGA
TGAATCATTTGTAATTTGATCTAGGGTAATATATATATATTTCTCATATA
CACATCATATAATACACATACACACATAAACACATACATATACTATATAT
GCATATTCATATACATTCATACATATATTTGTATACTTAGCTATTCATAA
TTGAAGTCATTATTTCAGACATTGTAAAAGTACTTAATTACTGATATTAG
AAAAAGGACATTCAAAAGACACA

AAAACCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA
ATGGCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGAGA
AATGCAAATCAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAA
CGAGGAACACTCCTTCATTGTTGGTGGGATTGCAAGCTTGTACAACCACT
CTGGAAATCAGTCTGGCTTTTCCTCTTTATATTGGACTTAGTAGTACAGG
AGGATCCCGCAATAACTCTCCTGGGCATATATCTAGAAGATGTTCCAACC
GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATAC
AAAAAATGTGGTACATTTGCACAATGGAGTACTACTCAGCTATTAAAAAT
AATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGGTCATCAT
CCTGAGTGAGGTAACCCAATCACAAAAGAACAGGCAGGGTGGTGGTGGCA
TATCCCTTTAATTCCAGCACTTGGAAGGCAGAGGCAGGCAGATTTCTGAG
TTCAAGGCCAGCCTGGTCTAAAAGTGAGTTCCAG

Query= MSMg01no477_i06.b1 MSMg01no477_i06.b1 CHROMAT_FILE:
MSMg01no477_i06.b1 PHD_FILE: MSMg01no477_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:58 2005
         (665 letters)



>mm_chr12_61324791_61325855
          Length = 1065

 Score = 1239 bits (641), Expect = 0.0
 Identities = 657/663 (99%), Gaps = 2/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactttatataattctgtctcctctatgaataaaagttttaagtcatttatgtgt 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactttacaaaattctgtctcctctatgaataaaagttttaagtcatttatgtgt 264

                                                                       
Query: 65  tttacactattcctaaaagtctgccacaaacagagatagatgtatttcagaaccaaaaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttacactattcctaaaagtctgccacaaacagagatagatgtatttcagaaccaaaaag 324

                                                                       
Query: 125 aaagtcctgaagtttttcctcctaagtttagcaatggcaattgaaaaaattattttacta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagtcctgaagtttttcctcctaagtttagcaatggcaattgaaaaaattattttacta 384

                                                                       
Query: 185 ttttttaatattatgtgtatgtgtgtatatatgtgtctgtgaatacatgttctcacaaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttttaatattatgtgtatgtgtgtatatatgtgtctgtgaatacatgttctcacaaag 444

                                                                       
Query: 245 ttcagatgagggatttggattccctgtaattgtagttacaagccattttgcaataattag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcagatgagggatttggattccctgtaattgtagttacaagccattttgcaataattag 504

                                                                       
Query: 305 gtggtttctgacagctaaatgtgcaaaaataatagtgctctaaactcatcagccaacttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtggtttctgacagctaaatgtgcaaaaataatagtgctctaaactcatcagccaacttt 564

                                                                       
Query: 365 tcagcccttgtttattacatttcaatgattcataaaatcattgagagcattgtaactttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcagcccttgtttattacatttcaatgattcataaaatcattgagagcattgtaactttt 624

                                                                       
Query: 425 ataagaccaactactaaaaattatgagatgaatcatttgtaatttgatctagggtaatat 484
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ataaaaccaactactaaaaattatgagatgaatcatttgtaatttgatctagggtaatat 684

                                                                       
Query: 485 atatatat--ttctcatatacacatcatataatacacatacacacataaacacatacata 542
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatatatatttctcatatacacatcatataatacacatacacacataaacacatacata 744

                                                                       
Query: 543 tactatatatgcatattcatatacattcatacatatatttgtatacttagctattcataa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tactatatatgcatattcatatacattcatacatatatttgtatacttagctattcataa 804

                                                                       
Query: 603 ttgaagtcattatttcagacattgtaaaagtacttaattactgatattagaaaaaggaca 662
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttgaagtcattatttcaaacattgtaaaagtacttaattactgatattagaaaaaggaca 864

              
Query: 663 ttc 665
           |||
Sbjct: 865 ttc 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)