Query= MSMg01no477_m14.b1 MSMg01no477_m14.b1 CHROMAT_FILE:
MSMg01no477_m14.b1 PHD_FILE: MSMg01no477_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:20 2005
(670 letters)
>mm_chr12_9553101_9554170
Length = 1070
Score = 1261 bits (652), Expect = 0.0
Identities = 664/670 (99%), Gaps = 4/670 (0%)
Strand = Plus / Minus
Query: 1 attcttggtgcttaacgaagcttagtgtttctcactgctgatcattctcccagcctttac 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 attcttggtgcttaatgaagcttagtgtttctcactgctgatcattctcccagcctttac 660
Query: 61 caacatgagaatccagcttcttcagacttccaacacgaactaaagaccagtagtgctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 caacatgagaatccagcttcttcagacttccaacacgaactaaagaccagtagtgctcca 600
Query: 121 gcaatccttcaggccccaagtgccagaatgagaattctgagacttccagactaacagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gcaatccttcaggccccaagtgccagaatgagaattctgagacttccagactaacagact 540
Query: 181 ctcagcctttctgtttacagacaacctctaccattctatcatggaaactaatgtaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctcagcctttctgtttacagacaacctctaccattctatcatggaaactaatgtaataaa 480
Query: 241 gctcccttaataggatgtatttgttgcttagatgttgttgctctagagacctctgactaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 479 gctcccttaataggatgtatttgttgcttagatgttgttgctctagagacccctgactaa 420
Query: 301 tacagaatgtcgtgaacttctttctgagactgtgggcattcaacccagggtgacttttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tacagaatgtcgtgaacttctttctgagactgtgggcattcaacccagggtgacttttca 360
Query: 361 tgatttcagacaggatttttaccatttaatctgtcccccttttctctgaacattatcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgatttcagacaggatttttaccatttaatctgtcccccttttctctgaacattatcagc 300
Query: 421 aaaatatctgcagtccttttatactccactgtaataatttccatgaatgtagtctattta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaaatatctgcagtccttttatactccactgtaataatttccatgaatgtagtctattta 240
Query: 481 gacatgtttctaatctcattgcttatgttactgctagtantgtgtgtgtgtgtgtgtgtg 540
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 239 gacatgtttctaatctcattgcttatgttactgctagta----gtgtgtgtgtgtgtgtg 184
Query: 541 tgtgtgtacgcaagggttatgtttgttttgttgaattgtaggccatattagtcaggcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgtgtgtacgcaagggttatgtttgttttgttgaattgtaggccatattagtcaggcttc 124
Query: 601 tctaaagaaacagaaacaatacaatgaatattgattgattcactgattgagtgataatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tctaaagaaacagaaacaatacaatgaatattgattgattcactgattgagtgataatac 64
Query: 661 attgacttgt 670
||||||||||
Sbjct: 63 attgacttgt 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_m14.g1 MSMg01no477_m14.g1 CHROMAT_FILE:
MSMg01no477_m14.g1 PHD_FILE: MSMg01no477_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:20 2005
(424 letters)
>mm_chr12_9372798_9373621
Length = 824
Score = 814 bits (421), Expect = 0.0
Identities = 423/424 (99%)
Strand = Plus / Plus
Query: 1 gatgggtaccaatgttgactgctgagaaatgcagggaagggaagcactgtgagactcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatgggtaccaatgttgactgctgagaaatgcagggaagggaagcactgtgagactcagc 260
Query: 61 tcatgatgccttgtgcttttgcctgcttgtacatatatcatcaagtgtctcaccagtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatgatgccttgtgcttttgcctgcttgtacatatatcatcaagtgtctcaccagtctg 320
Query: 121 tccttcccagcatcagtcttgtacatcacaacaactggaaataccattatctgaacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttcccagcatcagtcttgtacatcacaacaactggaaataccattatctgaacagaa 380
Query: 181 ctgcgtttctgcagagtccccaagtctcagtggataatctgacatcatagaacatgatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcgtttctgcagagtccccaagtctcagtggataatctgacatcatagaacatgatgg 440
Query: 241 atcatctcagaccatatgccctgaaagacgtacataccataggtaagccaaagattatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcatctcagaccatatgccctgaaagacgtacataccataggtaagccaaagattatgt 500
Query: 301 cacatgtgctctggtctctccattgaaactactgtccgccagtagtttgggctccaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatgtgctctggtctctccattgaaactactgtccgccagtagtttgggctccaaatg 560
Query: 361 aaagcacagaggcaggaaaaagccagcacttgaagctctctatactangagcatggggtt 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 aaagcacagaggcaggaaaaagccagcacttgaagctctctatactaggagcatggggtt 620
Query: 421 acct 424
||||
Sbjct: 621 acct 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
