Query= MSMg01no477_n01.b1 MSMg01no477_n01.b1 CHROMAT_FILE:
MSMg01no477_n01.b1 PHD_FILE: MSMg01no477_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:22 2005
(679 letters)
>mm_chr12_80660189_80661268
Length = 1080
Score = 1239 bits (641), Expect = 0.0
Identities = 668/679 (98%), Gaps = 5/679 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcttaa---tatcgttactatttcttccagaagtattaccacaagtgttcagt 60
||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttaaaagta--gttactatttctttcagaagtattaccacaagtgttcagt 261
Query: 61 gacggctgtatgacacagcaacctgacttttctacaatatctaaaagttaaaatggacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gacggctgtatgacacagcaacctgacttttctacaatatctaaaagttaaaatggacaa 321
Query: 121 tcaaccacagtaaaaggtgatatgcttaccctttgcctgcagtctatttaaccaagccaa 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 tcaaccacagtaaaaggtgatatgcttaccctttgcctgcagtctgtttaaccaagccaa 381
Query: 181 gatgaagcaagagtgctgggaaatgagctgttctgagtaacgtatttgtttaggctgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gatgaagcaagagtgctgggaaatgagctgttctgagtaacgtatttgtttaggctgctt 441
Query: 241 cttaacctctgcttcctctccatggtatctacctttttcaatgctctttttgtgtaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cttaacctctgcttcctctccatggtatctacctttttcaatgctctttttgtgtaggat 501
Query: 301 ggcatgttagctgttagaataatagagatcatacccaccgcgccagcactagtctgtccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggcatgttagctgttagaataatagagatcatacccaccgcgccagcactagtctgtccc 561
Query: 361 agtctgatcacactcacttcactgcttaccagcaggagctcaagggtaagtagcaatggg 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agtctgatcacactcacttgactgcttaccagcaggagctcaagggtaagtagcaatggg 621
Query: 421 gcattaaacaaacaagccagctaagagggctgtctaggcccaaggactagagtttctgga 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 622 gcattaaacaaacaagccagctaagagggctgtctaggcccaaggaccagagtttctgga 681
Query: 481 tttgtttaaagaattaagctcatgcattgcactttctccctttgcagcacagatagaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttgtttaaagaattaagctcatgcattgcactttctccctttgcagcacagatagaaat 741
Query: 541 ctttgctgggggaacatttcaggatcccagctgtgagtataacttacaatggaaaatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctttgctgggggaacatttcaggatcccagctgtgagtataacttacaatggaaaatgtt 801
Query: 601 tttcagtttggaaagaggcacttgcacttctgtaatggaagacaaagataacaagggaaa 660
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 802 tttcagtttggaaagaggcacttacacttctgtaatggaagacaaagataacaagggaga 861
Query: 661 aaatatgttcaggattgtc 679
|||||||||||||||||||
Sbjct: 862 aaatatgttcaggattgtc 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1080
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1070
Effective search space: 715830
Effective search space used: 715830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_n01.g1 MSMg01no477_n01.g1 CHROMAT_FILE:
MSMg01no477_n01.g1 PHD_FILE: MSMg01no477_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:22 2005
(240 letters)
>mm_chr12_80868613_80869252
Length = 640
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Minus
Query: 1 ttctccactcaaaacatcagggtattcacccaatcctttccctttgccagatttcctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttctccactcaaaacatcagggtattcacccaatcctttccctttgccagatttcctgag 380
Query: 61 cgatgctaactcagtctggtcaaaaagtgggataaaggtgaggcagggcatcaggagata 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cgatgccaactcagtctggtcaaaaagtgggataaaggtgaggcagggcatcaggagata 320
Query: 121 caacctttgtgagttttaaaaagatcaggctctagggttccttcctctggagttgggaga 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 319 caacctttgtgagttttaaaaagatcaggctctagggttcctttctctggagttgggaga 260
Query: 181 gaagattaagtagggggtggacagtattactttctgaatagagggattctctcttgagg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gaagattaagtagggggtggacagtattactttctgaatagagggattctctcttgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
