NNAACTATATTGCGGCCGCTATACACTCCTATAGTTCAGGATCCGCGGAT
TCTTAGGATCAACCTAGATGGAGACACGATGCACAGCGATCTGGAGCAGT
GCAATCTCATTCTTGGGGGAATTCCCAAGGGGTTTTTGTTTAATAAAAAG
GGGGGCCTAAAAAAAAAACCCCCCCCCCTTCTTTTTTTTTGTGTTCTTTT
CTTTTTGTGGTTTTTTTTGTTTCTACTCCCCCCCCTTTCTCTTACTTTTT
TTTTTTTGTGGGGCTTTTTATTTTATTTATCCTTTTTTTCTTCCTTCCCC
TTTTCTTTTTTCTTTTTTCTTCTTTCTCTCTTTATTTTTTTTTCTTCTTC
TTTTTTCCTCTTTTTTTTTTGTCTCCTTCTTTTTCGCTTATTCTTTTTTC
TCTTTTTTTTGTTTTCTTTTTTCATTTTTTCCCTTCTTTTTTCCGTCCCC
TTTCTGTTTTTTTTGCCTACTTTTTTTCCCTTTTTTTCTTCTCTCTTTTT
TTTTTTTTTTCCCTTTTCTTTTTTTTTTTCTTCTTTTGTTCTCGTCTTTT
TTATTTACCCCCTTTTTTCTGTTTGTTATGCTTTTTATGGTGTTCCTTTT
TTTTTTTTTTTTTTTG

NNNNNTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATATTGGTTTAAATTTTT
CTTTTGTTCTTGATATTATAGTATAATTACATCATTTACTTCTTCCCCTT
CCTCCCACCAAAGCCTCTCATATACCTCTTTCTTTCTTTTCAAACTCACA
GCCTGTGTTTTTACTTAGTTATTATTATTTGAATATGTGTATATATACAT
GAGCATTCCTAAATAATGTCTACTCCATGTGTATAATGTCACTTTTTTTT
TTTTGTATATGTTAAGGGCTAACCAATTGGTTTTGGACATTTTACTTTTA
TTTAAACAATATTTTTCTGTAATTCTTTTTATGGCCTACAAATGTAGACT
TAAGTAGAAAAGATTTATCTCGATGTTAAATTTTTGAAAATGCATAGTTA
ACAAATATATATGATGAAAAGAGTAGACAACCACTTGAATCTGTATTTCC
ATGTTCTAGAATACAGTTAACATTTTGTATTGTTAATTCTTGAAAAAACT
GTTGAAATTAATATTCTGTTTAATTCCTATAACTTATAAAAAAACTGATG
TTCACAGGGCATAGGCAACTTGTCCAGCTGAGTGAAAATAAAATCTGAAA
CCAAACTGTGGTGGTTAGTTTAATTGTTAACTTGACACAATCTAGAATCA
CCTGGAAATAGAGTTACACTGAGAGATTTTCTGGATCAAATTGTCTTGTT

Query= MSMg01no477_n05.g1 MSMg01no477_n05.g1 CHROMAT_FILE:
MSMg01no477_n05.g1 PHD_FILE: MSMg01no477_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:22 2005
         (629 letters)



>mm_chr12_40210673_40211701
          Length = 1029

 Score = 1180 bits (610), Expect = 0.0
 Identities = 622/628 (99%), Gaps = 4/628 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tatattggtttaaatttttcttttgttcttgatattatagtataattacatcatttactt 60
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tatattggttaaaatttttcttttgttcttgatattatagtataattacatcatttactt 970

                                                                        
Query: 61   cttccccttcctcccaccaaagcctctcatatacctctttctttcttttcaaactcacag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969  cttccccttcctcccaccaaagcctctcatatacctctttctttcttttcaaactcacag 910

                                                                        
Query: 121  cctgtgtttttacttagttattattatttgaatatgtgtatatatacatgagcattccta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909  cctgtgtttttacttagttattattatttgaatatgtgtatatatacatgagcattccta 850

                                                                        
Query: 181  aataatgtctactccatgtgtataatgtcacttttttttttttgtatatgttaagggcta 240
            |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 849  aataatgtctactccatgtgtataatgtcac----ttttttttgtatatgttaagggcta 794

                                                                        
Query: 241  accaattggttttggacattttacttttatttaaacaatatttttctgtaattcttttta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793  accaattggttttggacattttacttttatttaaacaatatttttctgtaattcttttta 734

                                                                        
Query: 301  tggcctacaaatgtagacttaagtagaaaagatttatctcgatgttaaatttttgaaaat 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733  tggcctacaaatgtagacttaagtagaaaagatttatctcgatgttaaatttttgaaaat 674

                                                                        
Query: 361  gcatagttaacaaatatatatgatgaaaagagtagacaaccacttgaatctgtatttcca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673  gcatagttaacaaatatatatgatgaaaagagtagacaaccacttgaatctgtatttcca 614

                                                                        
Query: 421  tgttctagaatacagttaacattttgtattgttaattcttgaaaaaactgttgaaattaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613  tgttctagaatacagttaacattttgtattgttaattcttgaaaaaactgttgaaattaa 554

                                                                        
Query: 481  tattctgtttaattcctataacttataaaaaaactgatgttcacagggcataggcaactt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553  tattctgtttaattcctataacttataaaaaaactgatgttcacagggcataggcaactt 494

                                                                        
Query: 541  gtccagctgagtgaaaataaaatctgaaaccaaactgtggtggttagtttaattgttaac 600
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493  gttcagctgagtgaaaataaaatctgaaaccaaactgtggtggttagtttaattgttaac 434

                                        
Query: 601  ttgacacaatctagaatcacctggaaat 628
            ||||||||||||||||||||||||||||
Sbjct: 433  ttgacacaatctagaatcacctggaaat 406


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)