Query= MSMg01no478_b07.b1 MSMg01no478_b07.b1 CHROMAT_FILE:
MSMg01no478_b07.b1 PHD_FILE: MSMg01no478_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:42 2005
(674 letters)
>mm_chr12_62830542_62831615
Length = 1074
Score = 1282 bits (663), Expect = 0.0
Identities = 672/675 (99%), Gaps = 1/675 (0%)
Strand = Plus / Plus
Query: 1 agagccagattggtactgctgagatatataatctcatgtactgagagctatcacattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagccagattggtactgctgagatatataatctcatgtactgagagctatcacattctc 260
Query: 61 agtctctccagcaagagtccacctattattgaactgcttgacctgcatcctgtgggctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtctctccagcaagagtccacctattattgaactgcttgacctgcatcctgtgggctaa 320
Query: 121 tataataaatccaatatttcattttaaagtttttcaaagggggtcctggatgagaatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataataaatccaatatttcattttaaagtttttcaaagggggtcctggatgagaatctt 380
Query: 181 ttcagttgccactatagaactcaagttggctaaatatcaaatccaagaagttgatctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagttgccactatagaactcaagttggctaaatatcaaatccaagaagttgatctctg 440
Query: 241 taagataggctgctctacaatgaaaagtcaaattccagtttgaaggatgtctgcatttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagataggctgctctacaatgaaaagtcaaattccagtttgaaggatgtctgcatttaa 500
Query: 301 acaaaacaaattggatgggaaagcatgagatcctgtaccttgggaggccttggaacatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaaacaaattggatgggaaagcatgagatcctgtaccttgggaggccttggaacatct 560
Query: 361 taattagacaggatattcagcttctcaagggtttatctcacttgagaaagtagtcttggg 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 taattagacaggatattcagcttctcaagggtttatctcacttaagaaagtagtcttggg 620
Query: 421 acatttagaggaaggtttcaataataaatagacagaatgtccatggacacttatcatctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatttagaggaaggtttcaataataaatagacagaatgtccatggacacttatcatctt 680
Query: 481 tctccagctatctgccaatggaaaaaaaaa-gtcagtggacattggtgtcagagttggag 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 tctccagctatctgccaatggaaaaaaaaaagtcagtggacattggtgtcagagttggag 740
Query: 540 attattcatgagctcaaaaacatgaactttcacttaccaatattgaactggctgtaggtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attattcatgagctcaaaaacatgaactttcacttaccaatattgaactggctgtaggtg 800
Query: 600 cttcttagtgacaaattttcctgtagtagaagccatcaatgaactctgattatgacatag 659
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 801 cttcttagtgacaaattttcctgtagtagaagccatcagtgaactctgattatgacatag 860
Query: 660 tacttggccagtgat 674
|||||||||||||||
Sbjct: 861 tacttggccagtgat 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_b07.g1 MSMg01no478_b07.g1 CHROMAT_FILE:
MSMg01no478_b07.g1 PHD_FILE: MSMg01no478_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:43 2005
(666 letters)
>mm_chr12_62992270_62993335
Length = 1066
Score = 1151 bits (595), Expect = 0.0
Identities = 620/631 (98%), Gaps = 7/631 (1%)
Strand = Plus / Minus
Query: 1 ttgggaggcaggtgtttgggtattaagcaataagatacctaatgaaaaaaataaataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgggaggcaggtgtttgggtattaagcaataagatacctaatgaaaaaaataaataaat 566
Query: 61 caaagtagtaaaatatagataagatggaaatcattttatattaaatgagtctcagtgttt 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaaggagtaaaatatagataagatggaaatcattttatattaaatgagtctcagtgttt 506
Query: 121 tcatcctacaatttcatagtatactttataaaagattcagctccctgaatataattacat 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcatcctacaattttatagtatactttataaaagattcagctccctgaatataattacat 446
Query: 181 tatggtgattacaaaatgaaagcatggaagggaaatggaaagacctagaaaatcacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatggtgattacaaaatgaaagcatggaagggaaatggaaagacctagaaaatcacagac 386
Query: 241 aaatgactttgtagctcttttctactcaaagccatgattgagggcaagtgaaaggttaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatgactttgtagctcttttctactcaaagccatgattgagggcaagtgaaaggttaaa 326
Query: 301 tgactgctctgttgagaccattagcgagcattaggcagaatttgatgaaacaaaggacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgactgctctgttgagaccattagcgagcattaggcagaatttgatgaaacaaaggacag 266
Query: 361 catctcttgaataaggcagaggatctcaggaaccccaaaaagcaagtacagcgcaagtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catctcttgaataaggcagaggatctcaggaaccccaaaaagcaagtacagcgcaagtgt 206
Query: 421 gcatgcacgcacacacacacacacacacacacacacacacacaaacatttctgaaagcat 480
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gcat----gcacacacacacacacacacacacacacacacac--acatttctgaaagcat 152
Query: 481 ctagcatccatacatgtgcttacttttgtatttgtatgcataagttaaattttaacattg 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 151 ctagcatccatacatgtgcttacttttgtatttgtgtgcataagttaaattttaacattg 92
Query: 541 aaaaaaatattttcaatgaagacgatgcctgtgaatggaaaacatgcggtgtacaaataa 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 91 aaaaaaatattttcaatgaagacgatgcctgtgaatggaaaacatgcagtgtacaaataa 32
Query: 601 tagtcaaagc-aaaaaaaaaaagtcttcagc 630
|||||||||| ||||||||||||||||||||
Sbjct: 31 tagtcaaagcaaaaaaaaaaaagtcttcagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
