XXXXXXXXXXXXXXXXXXXXXXXXXXXCCAAAGAGGATCCGCGGAATTCC
TGATTTCCTGGATCTGGTATACAACTTCCACTCTATCCTTTGTATGTTTA
GATTTTTTCTAAGGTCCTCTACTGAATTCTCTTCTACTAATTCTTGTGGA
CAGTTTACCAATGCTCACATCATCTAGCCTTCACCTCTAGACATCTTTGA
ACTTCTCCAGATTGCAATCTTGGGAGAAGGTTTATAAAACCTTATCTGTT
GCCATCACTTTCTAGTCACTCACAGGACTATAGTGGCACTGCTGTTCTTT
TGAATCATGTTTTTTCAAGTACTGCATAGCCAGTGAGAGCCTGGCAGATG
GGTTGGGGGCTTCGAGGTCCCCACAAACTTTGACATTGCCCATCTTTTCC
TAAATAAAAAGAAACAGCGTTTCTGCACCTTTGTGTCTATGCAACCCTGC
CCATCTGCCATTCAGATGGCTGTGTTTGTCCCATTCATACAGGAATTCCT
GGTCTACTTCTCTCTGCTGTGCAGGTGTCCTATGACCCTCTGTTCTTCCA
TCTTATACTTAATGCCACTATATCATCATCACAGGATTTCAGAAATAGCT
AAACAGCAAATTTTTCAACTCTAGAAGAGATCAAAACTTTGCTGCAAGGA
GCTTGTCATGCTCAAAAGAGACTGAGAGCTCTGATGAATTAAAAAAAAAA
ACCTATTCGTATACATCTCTAATAGC

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGCTAAATGTCTTCTCTAGCCTCAGCCTCCATT
CCTATAGAAGTTTGGATCCCAGGATTCTCTTTTCTGTCTTGACCCAGTGT
GAACATTTTAGTCTAAGATAGTGGCACTTCTGTTTGTACAAGTGACTTTA
GCCTTCCGAGAGCCTCTTAGAAAGCCAAGGCAGGTTCCTTCGGTGCCACA
GAAGCTCATCCACAGTGAGCCCACGAAAGGCTCCTTTTTGCCACGGTGTG
TCAGCCTGCTGATGAACATAACCTTCCAAGCCTTAAAAGCCACCTTTGTC
TGAAAGCATTAACCACAACCTTAGAGATTTCAGAGTTCTTAACAAAGGAA
CTTACAGTCACACTCTGATTTGATCTTTACCCTGAAGCCATTTCTTATGT
TGACAATTTTTTTTTTTAATTGACTGGGGAGATAGAAGATAAGGAACAAT
GCACTTTCTTTTCAGCATGTTCTGGCCCCTCACTACTTCCTTAAGTGCAT
CTGTCCTTACTAGTACCTTATGATGGACAGCTAAAAGGAGCCAATTAAAA
TGTCTGACTTTCAGTGAGGCCATCACATTCACCCAATCCAGAAGTTTATT
AGTTACTATCAGTGATGTTTTCCTAAACTGTCCCAGAACTAACTCACTCA
GAATGGTGTGTTTTCTAGCCTGCT

Query= MSMg01no478_h19.b1 MSMg01no478_h19.b1 CHROMAT_FILE:
MSMg01no478_h19.b1 PHD_FILE: MSMg01no478_h19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:13 2005
         (606 letters)



>mm_chr12_119874466_119875470
          Length = 1005

 Score = 1077 bits (557), Expect = 0.0
 Identities = 593/611 (97%), Gaps = 11/611 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctggtatacaacttccactctatcctttgtatgtttagattttttctaaggtcctctact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtatacaacttccactctatcctttgtatgtttagattttttctaaggtcctctact 260

                                                                       
Query: 61  gaattctcttctactaattcttgtggacagtttaccaatgctcacatcatctagccttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaattctcttctactaattcttgtggacagtttaccaatgctcacatcatctagccttca 320

                                                                       
Query: 121 cctctagacatctttgaacttctccagattgcaatcttgggagaaggtttataaaacctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cctctagacatctttgaacttctccagattgcaatcttgggagaaggtttataaagcctt 380

                                                                       
Query: 181 atctgttgccatcactttctagtcactcacaggactatagtggcactgctgttcttttga 240
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 atctgttgccatcacttactagtcactcacaggactatagtagcactgctgttcttttga 440

                                                                       
Query: 241 atcatgtttttt-----caagtactgcatagccagtgagagcctggcagatgggttgggg 295
           ||||||           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcatg------gaggccaagtactgcatagccagtgagagcctggcagatgggttgggg 494

                                                                       
Query: 296 gcttcgaggtccccacaaactttgacattgcccatcttttcctaaataaaaagaaacagc 355
           ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 495 gcttcaaggtccccacaaactttgacattgcccgtcttttcctaaataaaaagaaacagc 554

                                                                       
Query: 356 gtttctgcacctttgtgtctatgcaaccctgcccatctgccattcagatggctgtgtttg 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtttctgcacctttgtgtctatgcaaccctgcccatctgccattcagatggctgtgtttg 614

                                                                       
Query: 416 tcccattcatacaggaattcctggtctacttctctctgctgtgcaggtgtcctatgaccc 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcccattcatacaggaattcctggtctacttctctctgctgtgcaggtgtcctatgaccc 674

                                                                       
Query: 476 tctgttcttccatcttatacttaatgccactatatcatcatcacaggatttcagaaatag 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctgttcttccatcttatacttaatgccactatatcatcatcacaggatttcagaaatag 734

                                                                       
Query: 536 ctaaacagcaaatttttcaactctagaagagatcaaaactttgctgcaaggagcttgtca 595
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctaaacagcaaatttgtcaactctagaagagatcaaaactttgctgcaaggagcttgtca 794

                      
Query: 596 tgctcaaaaga 606
           || ||||||||
Sbjct: 795 tgatcaaaaga 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1005
Length adjustment: 10
Effective length of query: 596
Effective length of database: 995
Effective search space:   593020
Effective search space used:   593020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)