Query= MSMg01no479_b19.b1 MSMg01no479_b19.b1 CHROMAT_FILE:
MSMg01no479_b19.b1 PHD_FILE: MSMg01no479_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:59 2005
(660 letters)
>mm_chr12_62751801_62752860
Length = 1060
Score = 1222 bits (632), Expect = 0.0
Identities = 653/660 (98%)
Strand = Plus / Minus
Query: 1 caaacaaagtatgtaatctctacagcaattgattttcagctatatagccttggcaaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 caaacaaagtatgtaatctctacagcaattgattttcagctatatagccttggcaaaggt 801
Query: 61 tgttttgaactttctggacctctaagtttcatctgtttgtctagtcttattggctcctcc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 800 tgttttgaactttctggacctctaagtttcatctgtttctctagtcttattggctcctcc 741
Query: 121 tccaggtggaaatgtttcaatttgaaggaaatagagatagaatacatgaatgtgtatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 740 tccaggtggaaatgtttcaatttgaaggaaatagagatagaatacatgaatgtgtgtttt 681
Query: 181 ctcaaaactactgaaggagatggtctgtttttatgatgaaaagattttgtaacatattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctcaaaactactgaaggagatggtctgtttttatgatgaaaagattttgtaacatattaa 621
Query: 241 tatatacataactatgtacttcctgcaatccctgccataggtagaaatgagtagaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatatacataactatgtacttcctgcaatccctgccataggtagaaatgagtagaaacat 561
Query: 301 gtaaacatattatggcttcactcaaagaaagatatatgcacaacgtatgaatactagaag 360
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 560 gttaacatattatggcttcactcaaagaaagatatatgcacaacgtatgaataccaggag 501
Query: 361 gcaaaggtctggaaagtcacctcataacctgtccatcatagctgccaaagtgttgagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcaaaggtctggaaagtcacctcataacctgtccatcatagctgccaaagtgttgagctt 441
Query: 421 tgaacctgatattgatattatgaggacacgctgaattatatatttacacatctcgtctag 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 tgaacctgatattgatattatgaggacacactgaattatatatttacacatctcgtctag 381
Query: 481 tgggagcagaatccaaaggcatgagcataccacaattcccttttgagaagtttgcatttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggagcagaatccaaaggcatgagcataccacaattcccttttgagaagtttgcatttt 321
Query: 541 caaagtactataaggctgagatataaatcaatggctctaaactgagaacaagcggataag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caaagtactataaggctgagatataaatcaatggctctaaactgagaacaagcggataag 261
Query: 601 aatccagaaagcatgatggatcttatcacatcaattcaactaattttttaacacaaatgt 660
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatccagaaagcatgatgggtcttatcacatcaattcaactaattttttaacacaaatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_b19.g1 MSMg01no479_b19.g1 CHROMAT_FILE:
MSMg01no479_b19.g1 PHD_FILE: MSMg01no479_b19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:59 2005
(654 letters)
>mm_chr12_62588111_62589167
Length = 1057
Score = 1222 bits (632), Expect = 0.0
Identities = 650/658 (98%), Gaps = 5/658 (0%)
Strand = Plus / Plus
Query: 1 tctatttagatctgtaccccatttttaatagggttatttcattctctggtatctgtcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatttagatctgtaccccatttttaatagggttatttcattctctggtatctgtcttt 260
Query: 61 ttgagttctttgtaaaattgggatattagccctctattggatgtagagttggtaaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagttctttgtaaaattgggatattagccctctattggatgtagagttggtaaagatc 320
Query: 121 ttttctcaatctgtggattgctgttttgtgctgtagatagtgtccttttgcgatgagtgg 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 ttttctcaatctgtggattgctgttttgtgctatagatagtgtccttttgcgatgagtgg 380
Query: 181 gaaaaacatgaagttacagatgtcttta----catacttttatttattttcatgacaatc 236
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 gaaaaacatgaagttacagatgtctttaattacatacttttatttattttcatgacaatc 440
Query: 237 ttaagactaatatattgttgttatttacatttttcaatcatggaacctgaaataatataa 296
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaagactaa-atattgttgttatttacatttttcaatcatggaacctgaaataatataa 499
Query: 297 tatgttcaagaccatgatcccaatagtgattgaaagtcagttgtcaggtgaacacattgt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatgttcaagaccatgatcccaatagtgattgaaagtcagttgtcaggtgaacacattgt 559
Query: 357 ggccaatggggaaaaaaagtcttgaatatacagcctcctcatcttctgaagacttgaaac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggccaatggggaaaaaaagtcttgaatatacagcctcctcatcttctgaagacttgaaac 619
Query: 417 ccaagttgaaatactaatatttgatttaaatctagtaatatagttgttaaaataaatctt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccaagttgaaatactaatatttgatttaaatctagtaatatagttgttaaaataaatctt 679
Query: 477 aaaataacttagatttttcccacaatgttttgtttgtttgtttgtttttgagaaatagat 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 680 aaaataacttagatttttcccacaatgttttgtttgtttgtttgtttttgagaaatggat 739
Query: 537 gcttaagatagatgctctgtacccttgccgctgccaagaccaatatgttcaggactataa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcttaagatagatgctctgtacccttgccgctgccaagaccaatatgttcaggactataa 799
Query: 597 ttatgcacatggttagccctgacaccaagtatgcttgcatgatccagggcacatctta 654
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttatgcacatagttagccctgacaccaagtatgcttgcatgatccagggcacatctta 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1057
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1047
Effective search space: 674268
Effective search space used: 674268
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
