Query= MSMg01no479_d07.b1 MSMg01no479_d07.b1 CHROMAT_FILE:
MSMg01no479_d07.b1 PHD_FILE: MSMg01no479_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:07 2005
(436 letters)
>mm_chr12_13080794_13081629
Length = 836
Score = 555 bits (287), Expect = e-162
Identities = 302/307 (98%)
Strand = Plus / Minus
Query: 1 cttgcataatcaaacacatattcaggctaatactcatacacataagacaaaaataaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cttgcataatcaaacacatattcaggctaatactcatacacataagacaaaaataaaatt 248
Query: 61 tcaggggggaacaaaaagcctctgacaagtgggcaacaaggcaaatgtttaaagctattt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 247 tcaggggggaacaaaaagcctctgacaagtgggtaacaaggcaaatgtttaaagctattt 188
Query: 121 tttatgttttaagtgtatgtatatgaaggaagtgttcacagtggcctagagatatactca 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttatgttttaaatgtatgtatatgaaggaagtgttcacagtggcctagagatatactca 128
Query: 181 aagctcaagttacaggcagatatgaattgactggtgtgggtgctaggatttgaatttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aagctcaagttacaggcagatatgaattgactggtgtgggtgctaggatttgaatttaga 68
Query: 241 tcttttggaatatttgtacatacttttgactgatgagccatctctccagcccctatgtga 300
|||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tcttttggaagagtagtacatacttttgactgatgagccatctctccagcccctatgtga 8
Query: 301 ggtgcct 307
|||||||
Sbjct: 7 ggtgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_d07.g1 MSMg01no479_d07.g1 CHROMAT_FILE:
MSMg01no479_d07.g1 PHD_FILE: MSMg01no479_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:07 2005
(430 letters)
>mm_chr12_12916105_12916934
Length = 830
Score = 658 bits (340), Expect = 0.0
Identities = 415/460 (90%), Gaps = 38/460 (8%)
Strand = Plus / Plus
Query: 1 actccactcttcctgccacctttgagaagtcccactgctgtcttttgggtaatatcttgg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actccattcttcctgccacctttgagaagtcccactgctgtcttttgggtaatatcttgg 260
Query: 61 ttccagtatctgtctacaggacccatttcatgtggaaggatgcagtgtctgtaagtgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccagtatctgtctacaggacccatttcatgtggaaggatgcagtgtctgtaagtgaac 320
Query: 121 accacctctggggcacctcatcacccttctcattgattcccccctccttctgttttacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accacctctggggcacctcatcacccttctcattgattcccccctccttctgttttacac 380
Query: 181 tgagcaaagcagccgttttcacacgcataattatgctttgcattcgcttagcactcccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagcaaagcagccgttttcacacgcataattatgctttgcattcgcttagcactcccaa 440
Query: 241 agcgtctttttac-----tctcccagccatttccttgtactatgcaaacgagtccgagag 295
|||||| || ||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 441 agcgtc-----acagcactctcccagccatttccttgtactattctaacgagtccgagag 495
Query: 296 attgacagcgaccctgcttcgcacagagaaaggaaaggcacgcagg-----aatgccagc 350
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 496 attgacagcgaccctgcctcgcacagagaaaggaaaggcacgcagggcaggaatgccagc 555
Query: 351 gtg--------------aagaactggggg-gggg-gggcatgt----ttcctatcctata 390
||| |||||||||||| |||| ||| || |||||||||||||
Sbjct: 556 gtggtgctgcctgagtgaagaactgggggtggggtggg---gtggggttcctatcctata 612
Query: 391 ctctacagcctttctgtggagccttacttcaaaacagtcg 430
|| | ||| |||||||||||||||||||||||||||||||
Sbjct: 613 ctttgcagtctttctgtggagccttacttcaaaacagtcg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
