Query= MSMg01no479_k18.b1 MSMg01no479_k18.b1 CHROMAT_FILE:
MSMg01no479_k18.b1 PHD_FILE: MSMg01no479_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:45 2005
(322 letters)
>mm_chr12_33803165_33803886
Length = 722
Score = 542 bits (280), Expect = e-158
Identities = 308/318 (96%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 1 gtgtgaacccacaccatcaatataccagaacccacaactgctttgtccttgcaaggttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtgaacccacaccatcaatataccagaacccacaactgctttgtccttgcaaggttgg 260
Query: 61 ggatttaaaactctgattagggacaatgtggggaacaaagaaatgacagacaaatgggca 120
| |||||||||||||||||||||||| | | ||||||||||||||||||| |||||||||
Sbjct: 261 gaatttaaaactctgattagggacaaggcgaggaacaaagaaatgacagataaatgggca 320
Query: 121 gagaaatgctgggatggataacctgaactctcggatggagaagtgtgagatgagtggaaa 180
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gagaaatgctggaatggataacctgaactcacggatggagaagtgtgagatgagtggaaa 380
Query: 181 cctgtcactagacagaaaaactgataaaaattgagcagattaaggaaccccagcaattct 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 cctgtcactagacagaaaaactgataaaagttgagcagattaaggaaccccagcaattct 440
Query: 241 catcacaccaggacaactgactaactaccatagagcctagagttctccatgctaatgagg 300
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 catcacaccaggacaactgactaactaccatagagcctag--ttctccatgctaatgagg 498
Query: 301 tatttagatgccccgccc 318
||||||||||||||||||
Sbjct: 499 tatttagatgccccgccc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_k18.g1 MSMg01no479_k18.g1 CHROMAT_FILE:
MSMg01no479_k18.g1 PHD_FILE: MSMg01no479_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:45 2005
(322 letters)
>mm_chr12_33983789_33984510
Length = 722
Score = 557 bits (288), Expect = e-163
Identities = 307/322 (95%), Gaps = 14/322 (4%)
Strand = Plus / Minus
Query: 1 gacttcacgttgagtgtaataaacgcagcatacagaaccagagaatctgcatgtcccgct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 582 gacttcacgttgagtgtaataaatgcagcatacagaaccagagaatctgcatgtcccgct 523
Query: 61 ggctggaaaggctctgtggttgtgtgggatggctgtgcaatgtctcttgtggcttgtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 --------------tgtggttgtgtgggatggctgtgcaatgtctcttgtggcttgtaaa 477
Query: 121 cactcgttttgaagggagttatttgagggtgtttggggaacggcatggcgtttgcttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cactcgttttgaagggagttatttgagggtgtttggggaacggcatggcgtttgcttcca 417
Query: 181 tgctgcctgaaagaatttgagcgctgagcagagcatacatcttggcagggaaatgggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgctgcctgaaagaatttgagcgctgagcagagcatacatcttggcagggaaatgggttt 357
Query: 241 gcttacaaagtgtgcatgtccaggtaagatgtgactcctcctgagcatggagtcataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcttacaaagtgtgcatgtccaggtaagatgtgactcctcctgagcatggagtcataaaa 297
Query: 301 ctcaaaagtagggcatcggttt 322
||||||||||||||||||||||
Sbjct: 296 ctcaaaagtagggcatcggttt 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
