Query= MSMg01no480_d08.b1 MSMg01no480_d08.b1 CHROMAT_FILE:
MSMg01no480_d08.b1 PHD_FILE: MSMg01no480_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:26 2005
(634 letters)
>mm_chr12_102109647_102110680
Length = 1034
Score = 1112 bits (575), Expect = 0.0
Identities = 617/631 (97%)
Strand = Plus / Plus
Query: 1 gcagagcctaagggcagtggtggtgtacacctttaatcccagcactcaggaggcaaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagagcctaagggcagtggtggtgtacacctttaatcccagcactcaggaggcaaaggc 260
Query: 61 agctggatctttgagtttgaggccagcctggtctacagagcgagttctagggcaaccaag 120
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctggatttttgagtttaaggccagcctggtctacagagcgagttctagggcaaccaag 320
Query: 121 gcatcactgtgacctgggctaatcgagaaagggtagagagcccacatgtggagtgttggc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 321 gcatcactgtgacctgggctaatcgagaaagggtagagagcccacacgtggagtgttagc 380
Query: 181 tgaaacactggggttcatactcaccaccaccagcaaaacagttatatctttgaaatgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaacactggggttcatactcaccaccaccagcaaaacagttatatctttgaaatgctt 440
Query: 241 ttttccctcttacagtcataatttgctgtttgatggggttcttccagccatgacatccca 300
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttcccccatacagtcataatttgctgtttgatggggttcttccagccatgacatccca 500
Query: 301 ctgtccctcacccccattcacccctgacatttcttacacacactttccatcagctcactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtccctcacccccattcacccctgacatttcttacacacactttccatcagctcactc 560
Query: 361 ctacacctagtctgactctttccccattttgagggggaaggaagccatatttaccagtat 420
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 ctacacctagcctgactctttccccgttttgagggggaaggaagccatatttaccagtat 620
Query: 421 tgcccaaaggtgagtcagacctccccagggctcaggcagatgagcgcgccctgatctttc 480
||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 621 tgcccaaaggtgagtcagacctctccagagctcaggcagatgagctcgccctgatctttc 680
Query: 481 acatcctccaaccctacatttctcaacaaaaccagaaactgagccactgaccaggcccca 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acatcctccaaccctaaatttctcaacaaaaccagaaactgagccactgaccaggcccca 740
Query: 541 ttacacatttattcctgacatcatggtgacatttcatgtgggatctgagcctactaaatg 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgcacatttattcctgacatcatggtgacatttcatgtgggatctgagcctactaaatg 800
Query: 601 ttgtttcatgtctttacacgtgtgtgtctgg 631
||||||||||||||||||| |||||||||||
Sbjct: 801 ttgtttcatgtctttacacatgtgtgtctgg 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_d08.g1 MSMg01no480_d08.g1 CHROMAT_FILE:
MSMg01no480_d08.g1 PHD_FILE: MSMg01no480_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:27 2005
(656 letters)
>mm_chr12_102296802_102297859
Length = 1058
Score = 737 bits (381), Expect = 0.0
Identities = 401/411 (97%), Gaps = 8/411 (1%)
Strand = Plus / Minus
Query: 250 gtcagtctctctctctctctctctcttcccccc--ctcaaaaaga----tttatttatta 303
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 1052 gtcagtctctctctctctctctctcttccccccctctcaaaaagatttgtttatttatta 993
Query: 304 tatgtaagtgcactgtagcttctttaggcacaccagaagagggcatcagatctcattacg 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 992 tatgtaagtgcactgtagcttctttagacacaccagaagagggcatcagatctcattacg 933
Query: 364 aatggttgtgagacaccatgtagttgtgggatttgaactcaagaccttcagaagagcact 423
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 932 aatggttgtgagacaccatgtagttgtgggatttgaactcaagacctccagaagagcact 873
Query: 424 aagccatctctccatctctttaaagtctctcttatatttatatttagaacttctacaatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 aagccatctctccatctctttaaagtctctcttatatttatatttagaacttctacaatg 813
Query: 484 acattaaatattgcatgtatccagtatatggcacacttatacgcatgttttctggatttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 acattaaatattgcatgtatccagtatatggcacacttatacgcatgttttctggatttt 753
Query: 544 ctttccctagttagaaaaggcatggacagaagac--tctggatgatttgatactggccca 601
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 752 ctttccctagttagaaaaggcatggacagaagactgtctggatgatttgatactggccca 693
Query: 602 ctgtgtgtaggtcttgaagtggctctaaaactacagtctcagtttaggctg 652
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctgtgtgtaggtcttgaagtggctctaaaactacagtctcagtttaggctg 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1058
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1048
Effective search space: 677008
Effective search space used: 677008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
