Query= MSMg01no480_d10.b1 MSMg01no480_d10.b1 CHROMAT_FILE:
MSMg01no480_d10.b1 PHD_FILE: MSMg01no480_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:27 2005
(534 letters)
>mm_chr12_108687736_108688668
Length = 933
Score = 951 bits (492), Expect = 0.0
Identities = 523/538 (97%), Gaps = 9/538 (1%)
Strand = Plus / Minus
Query: 1 cttctgatacagcatttagcattatggtacacaacgacagaccaaacctcaacagagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cttctgatacagcatttagcattatggtacacaacgacagaccaaacctcaacagagtca 728
Query: 61 ggggtgagggagggtgtcataccacaggctgagaatcaccctgtgtggaggcagtgacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggggtgagggagggtgtcataccacaggctgagaatcaccctgtgtggaggcagtgacaa 668
Query: 121 ctacagatgggatgacacacctgggacaacagggtacaaacaatttccaagtcactgaca 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ctacagataggatgacacacctgggacaacagggtacaaacaatttccaagtcactgaca 608
Query: 181 gagtgccagagggtctacaaggcaagaatgcagagaaggctgaggggctacatgggtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 607 gagtgccagagggtctacaaggcaagaatgcagagaaggctgaggggctacatggatcta 548
Query: 241 aagta----ttttttgtcaaatcttctgagacagtgagtgcaggtatcattgataaattc 296
||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aagtagggc-----tggcaaatcttctgagacagtgagtgcaggtatcattgataaattc 493
Query: 297 acccagtcacggcatcgtaccagtgatgtacctaggcagctgccgggtatgacggagaca 356
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 acccagtcacggcaacgtaccagtgatgtacctaggcagctgccgggtatgacggagaca 433
Query: 357 actggaggctcagaggaagaggaagccactgggtcattctagacttggtaaagatatgat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 actggaggctcagaggaagaggaagccactgggtcattctagacttggtaaagatatgat 373
Query: 417 aggattttatctctccttcagagatgtcacaggtttagaaggtggcaaaagaaaacatat 476
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 372 aggattttatctctccttcagagatgtcacaggtttagaaggtggcagaagaaaacgtat 313
Query: 477 caaaaagacagagcgggtttgatggcagcaatacagacatgctggcacaggagacagg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caaaaagacagagcgggtttgatggcagcaatacagacatgctggcacaggagacagg 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_d10.g1 MSMg01no480_d10.g1 CHROMAT_FILE:
MSMg01no480_d10.g1 PHD_FILE: MSMg01no480_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:27 2005
(270 letters)
>mm_chr12_108508504_108509173
Length = 670
Score = 491 bits (254), Expect = e-143
Identities = 266/270 (98%)
Strand = Plus / Plus
Query: 1 ctgcgtctcactggccccaagtgtgtcctccaagtggctgtgacattgtctgcatcacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcgtctcactggccccaagtgtgtcctccaagtggctgtgacattgtctgcatcacca 260
Query: 61 atctctaggctttcagacaggcttcagtttggccctcatgcagaagttacctccttggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctctaggctttcagacaggcttcagtttggccctcatgcagaagttacctccttggct 320
Query: 121 gtaatgaggaagcggccactgccctgacaacagggcctttttgttcctcctacaaagaag 180
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gcaatgaggaagcagccactgccctgacaacagggcctttttgttcctcctacaaagagg 380
Query: 181 ttaactgagatggcaagatcaacccactgttggtggcaccatcccctaagctaggagcct 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaactgagatggcaagatcagcccactgttggtggcaccatcccctaagctaggagcct 440
Query: 241 agactgtaaaaaaggagaaagtgggcagaa 270
||||||||||||||||||||||||||||||
Sbjct: 441 agactgtaaaaaaggagaaagtgggcagaa 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
