Query= MSMg01no480_p06.b1 MSMg01no480_p06.b1 CHROMAT_FILE:
MSMg01no480_p06.b1 PHD_FILE: MSMg01no480_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:25 2005
(453 letters)
>mm_chr12_74981003_74981855
Length = 853
Score = 746 bits (386), Expect = 0.0
Identities = 418/436 (95%), Gaps = 16/436 (3%)
Strand = Plus / Minus
Query: 1 agtccctgagctgagctgactgagggaatcctacaatgctgtgggtcctcctcagggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agtccctgagctgagctgactgagggaatcctacaatgctgtgggtcctcctcagggctc 365
Query: 61 cagtctttggatgctattgttaccgtgtatctaactctgtttgccaactatctcggcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagtctttggatgctattgttaccgtgtatctaactctgtttgccaactatctcggcaga 305
Query: 121 gggtgttgagccatatccttccaaaggttctgatctgagtcctccatttggagagggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gggtgttgagccatatccttccaaaggttctgatctgagtcctccatttggagagggttt 245
Query: 181 ttgatgctattcatattcacatctcttctttgttatattaggaatctct--ctctctctc 238
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 244 ttgatgctattcatattcacatctcttctttgttatattaggaatctctgtctctctctc 185
Query: 239 tctttttctctctctctct--ctctctctctctctctctcacacatcacacacacacaga 296
||| |||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 184 tct----ctctctctctcttcctctctctctctctctctc-----tcacacacacacaga 134
Query: 297 gatttaacataaaaagaaaaaaaaaaccttctgaccagcacatcaccaagtatgacctat 356
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 133 gatttaacataaaaagaaaaaaa---ccttctgaccagcacatcaccaagtatgacctat 77
Query: 357 ttcttcccttttttctttccttttttattcttgtatccacgtgtgatttagaactctact 416
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 76 ttcttcccttttttttttccttttttattcttgtatctacgtgtgatttagaactctact 17
Query: 417 ctacaagcttctgttc 432
||||||||||||||||
Sbjct: 16 ctacaagcttctgttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_p06.g1 MSMg01no480_p06.g1 CHROMAT_FILE:
MSMg01no480_p06.g1 PHD_FILE: MSMg01no480_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:25 2005
(224 letters)
>mm_chr12_74753996_74754619
Length = 624
Score = 389 bits (201), Expect = e-113
Identities = 219/225 (97%), Gaps = 2/225 (0%)
Strand = Plus / Plus
Query: 1 ctctccctctctccatcccttcctctcttcctctcatcttcttctcccccctgcccccac 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ctctccctctctccatcccttcctctcttcctctaatcttcttctcccccctgcccccac 260
Query: 61 ctctgccc-ttctcccagccgaggcaccagccacagctgtggcaagagcctgactgcctc 119
|||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgcccctt-tcccagccgagacaccagccacagctgtggcaagagcctgactgcctc 319
Query: 120 ttagagaatgtgtctggcttgggcttgctcccagccacccctttcatgttaccacagggg 179
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 ttagagaatgtgtctggcttgggcttgctcccagccacccccctcatgttaccacagggg 379
Query: 180 ttgcttgacacaggtagtgtggaggagctgaggctggaggcatgc 224
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgcttgacacaggtagtgtggaggagctgaggctggaggcatgc 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
