Query= MSMg01no481_g06.b1 MSMg01no481_g06.b1 CHROMAT_FILE:
MSMg01no481_g06.b1 PHD_FILE: MSMg01no481_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:01 2005
(642 letters)
>mm_chr12_105937899_105938939
Length = 1041
Score = 1176 bits (608), Expect = 0.0
Identities = 632/640 (98%), Gaps = 1/640 (0%)
Strand = Plus / Plus
Query: 3 gaattctccagtctgttccccggtttaaagtctttatagtagtacactgcaaccttccca 62
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctccagtctgtggcccggtttaaagtctttatagtagtacactgcaaccttccca 262
Query: 63 tacagcggcggcgagctgtcgtcaggttggcaagaggaaatagttccaagctagcactgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tacagcggcggcgagctgtcgtcaggttggcaagaggaaatagttccaagctagcactgc 322
Query: 123 ccaagctagtctgtgctgaactgaattcttccagacacagcctggagatcacaggtcact 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaagctagtctgtgctgaactgaattcttccagacacagcctggagatcacaggtcact 382
Query: 183 gcagactcactccagcaaatggctaaggctacactgtaacatgagagggaaggaatctga 242
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcagagtcactccagcaaatggctaaggctacactgtaacatgagagggaaggaatctga 442
Query: 243 gagggctctgattttatttctaagtggaaacataacttatattttatgcctctggaatgg 302
|||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 443 gagggctctgattttatttctaagtggaaacataacaga-agtttatgcctctggaatgg 501
Query: 303 ggaggggaggtaagagaaatcacactgcaccaaaaccaacactatttctgaagtcacaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggaggggaggtaagagaaatcacactgcaccaaaaccaacactatttctgaagtcacaga 561
Query: 363 cggcctgccaacacatgaaatatctactacatggcaaacgtacagcagaaagaaaaaaac 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 562 cggcctgccaacacatgaaatatctactacatggcaaacgtacagcagaaagaaaacaac 621
Query: 423 aaaaaacaacattcttcagtcaacacaaacaaaaagctccatgctgagagcttaccattt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaaaaacaacattcttcagtcaacacaaacaaaaagctccatgctgagagcttaccattt 681
Query: 483 catccttttcccacttctctgagttacttttgtcttggtttaccacataaccaggaggaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 catccttttcccacttctctgagttacttttgtcttggtttaccacataaccaggaggaa 741
Query: 543 gccaattcacaggaggatcgaatatcgacaccaccatgcggctgggcagtcccttcttct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gccaattcacaggaggatcgaatatcgacaccaccatgcggctgggcagtcccttcttct 801
Query: 603 tgccaaggcgatacaggttacagttgctgaccttcggcag 642
||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgccaaggcgatacaggttacagttgctgaccttcggcag 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_g06.g1 MSMg01no481_g06.g1 CHROMAT_FILE:
MSMg01no481_g06.g1 PHD_FILE: MSMg01no481_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:01 2005
(138 letters)
>mm_chr12_106099919_106100456
Length = 538
Score = 213 bits (110), Expect = 4e-60
Identities = 128/138 (92%), Gaps = 7/138 (5%)
Strand = Plus / Minus
Query: 1 aggctgtgattgtgatatggaaaatcttccccagaggaacactggggtggagggaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aggctgtgattgtgatatggaaaatcttccccagaggaacactggggtggagggaggcca 248
Query: 61 gatgggctgcgtgaaaaacccagcctccctccgtgggggggggggggggcggnncattcc 120
||| |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 247 gatacgctgcgtgaaaaacccagcctccctccgtgggggggcggggg-------cattcc 195
Query: 121 tccattaactgccacaca 138
||||||||||||||||||
Sbjct: 194 tccattaactgccacaca 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 538
Length adjustment: 8
Effective length of query: 130
Effective length of database: 530
Effective search space: 68900
Effective search space used: 68900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
