Query= MSMg01no483_g10.b1 MSMg01no483_g10.b1 CHROMAT_FILE:
MSMg01no483_g10.b1 PHD_FILE: MSMg01no483_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:35 2005
(571 letters)
>mm_chr12_68989481_68990451
Length = 971
Score = 1081 bits (559), Expect = 0.0
Identities = 565/567 (99%)
Strand = Plus / Plus
Query: 5 gaattcctttcttctaatgccttgttctgacaaaaaggtaatcgaagtgttcttgcatga 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttcatctaatgccttgttctgacaaaaaggtaatcgaagtgttcttgcatga 264
Query: 65 cttctccctctcatattcatgtcatcttattggtaatggttctgtctgactctggctgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttctccctctcatattcatgtcatcttattggtaatggttctgtctgactctggctgct 324
Query: 125 actgttatcatccagcattgtattagttgaaaccaaatttgagacagtaaacattaaccc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgttatcatccagcattgtattagttgaaaccaaatttgagacagtaaacattaaccc 384
Query: 185 tgatacagaagataagcctgactgaaggataaggctacattaagctatttaatctatata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgatacagaagataagcctgactgaaggataaggctacattaagctatttaatctatata 444
Query: 245 tcatttataaattaagctgcagaacacataagaaacactatgcaaaactaaatatatata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcatttataaattaagctgcagaacacataagaaacactatgcaaaactaaatatatata 504
Query: 305 ttgatgttttaatgcatattaaaataaattattaatatgctgtgtattgtgagaaaactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgatgttttaatgcatattaaaataaattattaatatgctgtgtattgtgagaaaactg 564
Query: 365 atacccttcaatctggctgtttcttacttctgtgaagtatcattttgttaatgactaacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atacccttcaatctggctgtttcttacttctgtgaagtatcattttgttaatgactaacc 624
Query: 425 aacctgtgaatgtttaccacctaatatattctattctgttggtggtttagtctcagggag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacctgtgaatgtttaccacctaatatattctattctgttggtggtttagtctcagggag 684
Query: 485 cccccaaagctccaggataattgattctgttggtcttcctgtgcagtcctatcctcttca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cccccaaagctccaggataattgattctgttggtcttcctgtgcagtcctatcctcttca 744
Query: 545 agtctgaaaaatcaagctataatacac 571
|||||||||||||||||||||||||||
Sbjct: 745 agtctgaaaaatcaagctataatacac 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_g10.g1 MSMg01no483_g10.g1 CHROMAT_FILE:
MSMg01no483_g10.g1 PHD_FILE: MSMg01no483_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:35 2005
(549 letters)
>mm_chr12_69092225_69093172
Length = 948
Score = 1023 bits (529), Expect = 0.0
Identities = 544/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Minus
Query: 1 tgtgtatcccaagatcttaaaagcacgggttcactattctcttgctgtccacacaccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tgtgtatcccaagatcttaaaagcacgggttcactattctcttgctgtccacacaccatg 689
Query: 61 attcacaaacttttgtacactgctttcttttgaactttctaatttctagctcctgagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 attcacaaacttttgtacactgctttcttttgaactttctaatttctagctcctgagtgt 629
Query: 121 gttagaattatggtaatttcatctacctgaaacatgtaatagcaaaataggctgattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gttagaattatggtaatttcatctacctgaaacatgtaatagcaaaataggctgattgtt 569
Query: 181 tatgcatcattgaattgtgtataatacatctgagtaataacatttaagttaaattttagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tatgcatcattgaattgtgtataatacatctgagtaataacatttaagttaaattttagt 509
Query: 241 actatataaaactcaaagacatgataaaccatgttattacctgaattttatccaattttt 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 508 actgtataaaactcaaagacatgataaaccatgttattacctgaattttatcca-ttttt 450
Query: 301 atttccctgttttcatattttactgaaatactttcatatttatcttttcatccttctgcc 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 449 atttccctgttttcatattttactgaaatattttcatatttatcttttcatccttctgcc 390
Query: 361 ctactccaaataaattagtaaatccaagttgaattggttaataacaaccaaagaggaatg 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 389 ctactccaaataaattagtaaatccaagttgaattggttattaacaaccaaagaggaatg 330
Query: 421 catgagaacaaaacgttaataaaaggccaaccctccctttaggttattcaaagaagttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 329 catgagaacaaaacgttaataaaaggccaaccctccctttaggttattcaaagtagttga 270
Query: 481 tgtacagaggaaatggaaagttaactgtatactgaatgtcatactaatcatgtctgtagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgtacagaggaaatggaaagttaactgtatactgaatgtcatactaatcatgtctgtagt 210
Query: 541 ttttggtag 549
|||||||||
Sbjct: 209 ttttggtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
