Query= MSMg01no484_b24.b1 MSMg01no484_b24.b1 CHROMAT_FILE:
MSMg01no484_b24.b1 PHD_FILE: MSMg01no484_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:34 2005
(669 letters)
>mm_chr12_48602892_48603967
Length = 1076
Score = 532 bits (275), Expect = e-155
Identities = 304/317 (95%), Gaps = 7/317 (2%)
Strand = Plus / Minus
Query: 360 atatatatat-atatatgaaaatgtcaaa------aaaaaatgagggtcatgtaagtgga 412
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 879 atatatatataatatatgaaaatgtcaaaaaaaataaaaaatgagggtcatgtaagtgga 820
Query: 413 attaaaatattctagcatgcttggttatatatgaaaatgtaaaatataaaagcagggaga 472
|||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 819 attaaaatattctagcatgcttggttgtatatcaaaatgtaaaacataaaagcagggaga 760
Query: 473 tgttctttcaaagacaacaaccagaatgtggccagtgaataagtctaatgaggaacaagt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tgttctttcaaagacaacaaccagaatgtggccagtgaataagtctaatgaggaacaagt 700
Query: 533 ctgtaggacatgacgatatgaacacatgaaatagtatagtcaactaaggcaaatcaaaga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ctgtaggacatgacgatatgaacacatgaaatagtatagtcaactaaggcaaatcaaaga 640
Query: 593 agaccaagagtctcgccagcatatcacttgtactgaaaatagtgatgaattgactgataa 652
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agaacaagagtctctccagcatatcacttgtactgaaaatagtgatgaattgactgataa 580
Query: 653 aaagcaacttttaagtg 669
|||||||| ||||||||
Sbjct: 579 aaagcaacctttaagtg 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1076
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1066
Effective search space: 702494
Effective search space used: 702494
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_b24.g1 MSMg01no484_b24.g1 CHROMAT_FILE:
MSMg01no484_b24.g1 PHD_FILE: MSMg01no484_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:34 2005
(576 letters)
>mm_chr12_48463744_48464717
Length = 974
Score = 1073 bits (555), Expect = 0.0
Identities = 571/577 (98%), Gaps = 4/577 (0%)
Strand = Plus / Plus
Query: 1 agagacattttttttttctacaaaagtgaagcaattctgaatgaaactgagagaagtcag 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagacattttttttt-ctacaaaagtgaagcaattctgaatgaaactgagagaagtcag 259
Query: 61 tttgagtcagttagcttagataggagatttgagctaaaatagattagttgaacctgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttgagtcagttagcttagataggagatttgagctaaaatagattagttgaacctgccag 319
Query: 121 ccagagttcagaaagagtgagaaatagtatgcttatttaacaggaagcctctgacaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccagagttcagaaagagtgagaaatagtatgcttatttaacaggaagcctctgacaggac 379
Query: 181 aattacttcatgagaataaaaggtaattttacactaatcattattataaaagtgtaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aattacttcatgagaataaaaggtaattttacactaatcattattataaaagtgtaccag 439
Query: 241 cctggtgtccagagtgagttccaggacagccagggctacacagaaaaacgctgtctcgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctggtgtccagagtgagttccaggacagccagggctacacagaaaaacgctgtctcgaa 499
Query: 301 aaaacaaaaca-caaataaacaaacaaccccacaaaacaaaaaacaaaacaaaacaaaac 359
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaacaaaaaaacaaataaacaaacaaccccacaaaacaaaaaacaaaacaaaacaaaac 559
Query: 360 aaaacaaccagaatagagtggtgtgcctaggaatttgagtttgtttctacaattctctcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaacaaccagaatagagtggtgtgcctaggaatttgagtttgtttctacaattctctcc 619
Query: 420 cttgataaaacatgctaaaacaaggatcagtcttgaagacaatgatactagctaggatcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttgataaaacatgctaaaacaaggatcagtcttgaagacaatgatactagctaggatcc 679
Query: 480 tattttttgaattctgataaaaatgagttgaaccttttttttttttcttgaaagtatttt 539
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 680 tattttttgaattctgataaaaatgagttgaacctttttttttt--cttgaaagtgtttt 737
Query: 540 acttcagattgaaaaatgaacggcttgcgcgctgctc 576
|||||||||||||||||||||||||||||||||||||
Sbjct: 738 acttcagattgaaaaatgaacggcttgcgcgctgctc 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 974
Length adjustment: 10
Effective length of query: 566
Effective length of database: 964
Effective search space: 545624
Effective search space used: 545624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
