Query= MSMg01no485_b07.b1 MSMg01no485_b07.b1 CHROMAT_FILE:
MSMg01no485_b07.b1 PHD_FILE: MSMg01no485_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:53 2005
(554 letters)
>mm_chr12_25905709_25906662
Length = 954
Score = 861 bits (445), Expect = 0.0
Identities = 464/471 (98%), Gaps = 4/471 (0%)
Strand = Plus / Minus
Query: 5 ggaattctgcacacctttc-c-tgtgggctggatcatgctgaccttctaacacaagcaga 62
||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ggaattctgcacacc--tcacatgtgggctggatcatgctgaccttctaacacaagcaga 412
Query: 63 aaacaacacagacctcaagccaaagcctgggtttgagctaaatacttacaaaggcttaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaacaacacagacctcaagccaaagcctgggtttgagctaaatacttacaaaggcttaag 352
Query: 123 tgccatgtcctctgtccctatgccctgttctcatgcccctgggactcagtcaccagtctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgccatgtcctctgtccctatgccctgttctcatgcccctgggactcagtcaccagtctg 292
Query: 183 aagagcaccagctccaggtcaggctgcaaatggctctctggtataagtgtctggttgatc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aagagcaccagctccaggtcaggctgcaaatggctctctggtataagtgtctggttgatc 232
Query: 243 agagcatctccaggggacgggcagaggatccccactttctacagtgaaatctgaagcagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 agagcatctccaggggacgggcagaggatccccactttctacagtgaaatctgaagcagg 172
Query: 303 aaggggtggtatcgaggcctggctgctaagtggcaggattggaatttgatcctaatcaat 362
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aaggggtggcagcgaggcctggctgctaagtggcaggattggaatttgatcctaatcaat 112
Query: 363 gtcgctttctcattccaacaacacactcccagtgtgaagcctgtgatagacagaccaagc 422
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gtcgctttctcgttccaacaacacactcccagtgtgaagcctgtgatagacagaccaagc 52
Query: 423 ttagcaggccaggaaatctcagctcagtgagaggctcaaagcaagaaggga 473
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 ttagcaggccaggaaatctcagctcagtgagaggctcaaagcaagaaggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_b07.g1 MSMg01no485_b07.g1 CHROMAT_FILE:
MSMg01no485_b07.g1 PHD_FILE: MSMg01no485_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:53 2005
(646 letters)
>mm_chr12_25845511_25846556
Length = 1046
Score = 1249 bits (646), Expect = 0.0
Identities = 646/646 (100%)
Strand = Plus / Plus
Query: 1 ctacttcacagaggaggctgcggtaggtgcttgatcaagtcggctgccactactgctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacttcacagaggaggctgcggtaggtgcttgatcaagtcggctgccactactgctatc 260
Query: 61 ttctggtctatgtgctgccattttcctttagtgggagaactgggaagctttgaattgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctggtctatgtgctgccattttcctttagtgggagaactgggaagctttgaattgctg 320
Query: 121 gctttccaaacttctggctatcttgagtcttaaagtcccttggaagaggctcaaagagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctttccaaacttctggctatcttgagtcttaaagtcccttggaagaggctcaaagagct 380
Query: 181 gcctcactggcccctgggatgccaggttgcagacagtctagccaccagaatccaggcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctcactggcccctgggatgccaggttgcagacagtctagccaccagaatccaggcagt 440
Query: 241 agctgcaccctgttctaaattctgtttctccgtgtactctgtaactgggccactctgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctgcaccctgttctaaattctgtttctccgtgtactctgtaactgggccactctgtca 500
Query: 301 gacatcctgaatcgttaatgaccttgagaagcaatcccagctctgaatgtgggattctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacatcctgaatcgttaatgaccttgagaagcaatcccagctctgaatgtgggattctgt 560
Query: 361 tctttgaagtcacccactttctttgtgggtctgttctcccctctcaggcacgcctccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctttgaagtcacccactttctttgtgggtctgttctcccctctcaggcacgcctccttc 620
Query: 421 cagctttgatggtgccactgtaacaactgggtttgcaattattaattcctgtgcacagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagctttgatggtgccactgtaacaactgggtttgcaattattaattcctgtgcacagca 680
Query: 481 aggtgcagttttaatatacagaaaatataattgctatcttgtgtaatcattttctgaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggtgcagttttaatatacagaaaatataattgctatcttgtgtaatcattttctgaggg 740
Query: 541 ctgaaagtgtaacctttaattaatatttcatcggcaggcggggcaggttacttgaatagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgaaagtgtaacctttaattaatatttcatcggcaggcggggcaggttacttgaatagg 800
Query: 601 gcctaaaaatattgctgtcccagtatgtagagaacgtgaattgtga 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcctaaaaatattgctgtcccagtatgtagagaacgtgaattgtga 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
