NGCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTGCCAGGCTCTCTGCAAGGGCAGTATGTGCTCTTAACCAGTG
AGCCAGCTCTCAGCAGAGCACCCCTCCCAGGATAGTTTTATTGGGAAAGA
AAACCTCAGCATAAGGGTTTCTATGGCCAAAAAGAGATGGGGCTATACAG
TCAGCAAGGTGACAAAGGCGCTTCCTACCAAACCAGGCATACTGAATTCT
ATCCCCAATATTTATGGGGTTGAAAGAGAAAAAAAACAACACTGCAAATT
AGCCTCTTATCTCCGTGTGAGCATGTGCAGGAGTGCACGTACACACACAC
ACACACACACACACACACACACACACACTACATATATATATATAATTTTA
AAAATGTTAACTTTATGAGGAAAAAATACCAGAATGAAACAAAAGCAGAG
CACTGGTTTTAAAAGCCAGTGTGCTCAGCTTTTATGGTATGAAAATCCCT
CCTGAATGTTAAAAAAAAAATCATAGATTCCCACAAAACATAAGTTTTGA
TACCAGCTGATGATATGTTTTTAAGTGATTCTGACGAATGTTCTATTTAT
AACTGAAAAGAGGTAGTACAATGCAAAGGAGATGTTGTTTACCAGGCAAT
GCTTGATGCACAAGAGAACTCTTAGTATTTGAAACAGCACCCCCAGCCCC
CTGGGGGACCCACCACGCATAAGTGGAGAACTACAGCTTTCTACCN

GAACAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTGTGTGTGTGAACATGTATATC
TCTACATGTATTTTTTTATTATTATGGTTTTTCTTTGGCTAATTTTCTTG
TTTTTGTATTATTCTCATTTGTTCGTTTTTGATTTGTTTTATTGTTTTTG
GTTTTTTTTTTTTTTTTTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTG
GCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAAATTAGAAAT
TGTTGTGTCTGGTCAGTAAATCTTTTCCTGGGTTCTAGCCTGGAAAGGCG
TTTTGGAAACCTGGAGGAGAAGAGGGGCTGGGCTGCGCGAGATAAGGAAG
GAACCAAGACAAAGCTCTCTGCTCAAGGTTCAATTTTTACTATTTCGGCA
CTCCGTTATAAAGGAAGGGGGAGGGGCCCAATTCCCGCCAAATAATCTTG
GAATCCAGTAGCAGGGTGATCATGTGATGGCTTCGGAACAGCAAAGCCGC
AGGTTCCAGCAGTAGGCTTGGCAGAAAGATTGAGCGGGAAGCTCCACCCC
TGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTAAAAGAAATCTGCC
TGCCTCTGCCTCCCGAGTGCTGGGATCAAAGGCGTCGTGCGCCACCACGC
CCAGCTGTTTTATTGTATTTTACTATTATTCTTTAGAAGCG

Query= MSMg01no485_g02.b1 MSMg01no485_g02.b1 CHROMAT_FILE:
MSMg01no485_g02.b1 PHD_FILE: MSMg01no485_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:18 2005
         (560 letters)



>mm_chr12_99698222_99699181
          Length = 960

 Score =  920 bits (476), Expect = 0.0
 Identities = 549/596 (92%), Gaps = 37/596 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagggcagtatgtgctcttaaccagtgagccagctctcagcagagcacccctcccagga 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 166 caagggcagtatgtgctcttaaccagtgagccagctctcagaagagcacccctcccagga 225

                                                                       
Query: 61  tagttttattgggaaagaaaacctcagcataagggtttctatggccaaaaagagatgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tagttttattgggaaagaaaacctcagcataagggtttctatggccaaaaagagatgggg 285

                                                                       
Query: 121 ctatacagtcagcaaggtgacaaaggcgcttcctaccaaaccaggcatactgaattctat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 286 ctatacagtcagcaaggtgacaaaggcgcttcctaccaaaccaggcatactgagttctat 345

                                                                       
Query: 181 ccccaatatttatggggttgaaagagaaaaaaaacaacactgcaaattagcctcttatct 240
           ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 346 ccccaatatttacagggttgaaagag-aaaaaaacaacagtgcaaattagcctcttatct 404

                                                                       
Query: 241 ccgtgtgagcatgtgcaggagtgcacgtacacacacacacacacacacacacacacacac 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccatgtgagcatgtgcaggagtgcacgtacacacacacacacacacacacacacacacac 464

                                                                       
Query: 301 ac-aca-----------------------------------ctacatatatatatataat 324
           || |||                                    || |||||||||||||||
Sbjct: 465 actacatatatatatatatatatatatatatatatatatatatatatatatatatataat 524

                                                                       
Query: 325 tttaaaaatgttaactttatgaggaaaaaataccagaatgaaacaaaagcagagcactgg 384
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttttaaaatgttaactttatgaggaaaaaataccagaatgaaacaaaagcagagcactgg 584

                                                                       
Query: 385 ttttaaaagccagtgtgctcagcttttatggtatgaaaatccctcctgaatgttaaaaaa 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ttttaaaagccagtgtgctcagcttttatggtatgaaaatccctcctgaatgttaaaaaa 644

                                                                       
Query: 445 aaaatcatagattcccacaaaacataagttttgataccagctgatgatatgtttttaagt 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaaatcatagattcccacaaaacataagttttgataccagctgatgatatgtttttaagt 704

                                                                   
Query: 505 gattctgacgaatgttctatttataactgaaaagaggtagtacaatgcaaaggaga 560
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gatgctgacgaatgttctatttataactgaaaagaggtagtacaatgcaaaggaga 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)