Query= MSMg01no486_c18.b1 MSMg01no486_c18.b1 CHROMAT_FILE:
MSMg01no486_c18.b1 PHD_FILE: MSMg01no486_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:24 2005
(603 letters)
>mm_chr12_3750130_3751132
Length = 1003
Score = 1077 bits (557), Expect = 0.0
Identities = 590/601 (98%)
Strand = Plus / Plus
Query: 3 ggggggggtgtggagagaaggtagggagataagatctcattctgtatcccaggctggcct 62
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 203 ggggggggcgtggagagaaggtagggagataagatctcattctgtagcccaggctggcct 262
Query: 63 agaacttttagccttacatagtataggctggctttgaactttcggtaatcttcctttgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agaacttttagccttacatagtataggctggctttgaactttcggtaatcttcctttgtc 322
Query: 123 agcctccctggggctaggattataagcctgcaccaccctggctgtctcactcctaattat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agcctccctggggctaggattataagcctgcaccaccctggctgtctcactcctaattat 382
Query: 183 gaaagtgctatcatctggaatagcatagctgaagaacagagtttttaatgctttccttgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaagtgctatcatctggaatagcatagctgaagaacagagtttttaatgctttccttgg 442
Query: 243 ggacttttttatgatttcttttcagtgaggaacaataattattggttttttacttgtatc 302
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggacttaatcatgatttcttttcagtgaggaacaataattattggttttttacttgtatc 502
Query: 303 ctgtcatttagattttagtcatcaataaacagaacataaagaatttaaaccatgcagatg 362
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 503 ctgtcatttagatttaagtcatcaataaatagaacataaagaatttaaaccatgcagatg 562
Query: 363 aatacaattagccagttcagagtgccctttctcacaaagcttcatttcaggatgcacaca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatacaattagccagttcagagtgccctttctcacaaagcttcatttcaggatgcacaca 622
Query: 423 tgagtgcacacctttagtcccagcactagaggcaaaggtaggaggatttctgtaagttcc 482
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcagtgcacacctttaatcccagcactagaggcaaaggtaggaggatttctgtaagttcc 682
Query: 483 aggccagccatgactacaaagtaagaccctatctcagaaagaaagtagaagcttcatttc 542
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 683 aggccagccatgactacaaagtaagaccctttctcagaaagaaagtagaagcttcatttc 742
Query: 543 agtttgggatttagttgggctatatatttgatggcccattgttcactgccacacttttgg 602
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agtttgggatttagttaggctatatatttgatggcccattgttcactgccacacttttgg 802
Query: 603 g 603
|
Sbjct: 803 g 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_c18.g1 MSMg01no486_c18.g1 CHROMAT_FILE:
MSMg01no486_c18.g1 PHD_FILE: MSMg01no486_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:24 2005
(397 letters)
>mm_chr12_3919233_3920029
Length = 797
Score = 455 bits (235), Expect = e-132
Identities = 319/397 (80%), Gaps = 76/397 (19%)
Strand = Plus / Minus
Query: 1 taagccagcatgttctacatagtgatcagccagggctatgcagtaagaccctgtctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 taagccagcatgttctacatagtgatcagccagggctatgcagtaagaccctgtctggaa 510
Query: 61 aactaaaaacaacctagtgtctgtatatgagaaagggaacaacacctgagccagggcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aactaaaaacaacctagtgtctgtatatgagaaagggaacaacacctgagccagggcatg 450
Query: 121 tacacagagggcagaggccacctcccagccagggcatgtacgcagagggcagaggccacc 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tacacagagagcagaggccacctcccagccagggcatgtacgcagagggcagaggccacc 390
Query: 181 tcccagccagggcatgtacacagagagcagaggccacctcccagccagggcatgtacaca 240
|||||||||||||||||||||||||
Sbjct: 389 tcccagccagggcatgtacacagag----------------------------------- 365
Query: 241 gagagcataggccacctcccagccagggcatgtacacagagggcagaggccacctcccag 300
||||||| |||||||||||
Sbjct: 364 -----------------------------------------ggcagagtccacctcccag 346
Query: 301 gagtcagttttctccaaccatgtgggttcagggactgcattcaggttgtcagccgtggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gagtcagttttctccaaccatgtgggttcagggactgcattcaggttgtcagccgtggtg 286
Query: 361 acaagcaccttttccagccccactctcagtgttagca 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 285 acaagcaccttttccagccccactctcagtgttagca 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
