CGCTCCCTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGA
AGATCCGCGGAATTCCTAATCTTTACCCTCCAGGACTTTTAACACGAAGG
CATAACATATTTTGTTGAAGGTTTTTTTTTTCAGCATCTAATGAGATGAT
CATATGGTTTTGTTTCTTGAGTTTGCTTATATAGTGTATTGCATTGATGT
ATTTTCATATATTGAGCCATCCCTGCATCCCACGGATGACGCCTACTTGA
CTTTGGTAAATGGTGGTTTTGATGTGTTCTTGGATTTGGTTTGCCAGAAT
TTTATTGAGTATTTTTGCACCAATATTCTTATTGGAGATTTGTCTGAAGT
TATCTTTCTTTGTTGTGTCTTTGTGTGGTTTAGGTATCAGAGTAACTATG
GCTTCATAAAATGAATTAGGTAAGGTTCTTTCTGTTTCTACTTTATGGAG
AGTATTGGTATGAGGTCTTCTTTGAAAGTTTGGTAGAATTCTGCACTAAA
ACCATTTCACCCTGGACTTCTTTTAGTTGGGAGATTTTTAATGAATATTT
CTATTTCCTAGGTGTTATGGGACCATTTAGATAGTTAATCTGATCTTGAT
TTAATTTGGTATGTGGTATCTATCTAGAAAGTCATTCATTTCATCTGGAT
TTTCCAGTTCTGTAGAGCATAGGCTTTCATAGTGGGTTCTGATGATTTTT
TTTTTTAAATT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATATTAGTAAGGACTAGTAGTTCAT
GCTCAACATTGCAGGAGAGAGAATTGCCTACCAGCTGTGGACCCCAATCA
TGACTTGTATTTTGATTTCCCTCTGCTTGAGTATGTTTCTCTATCACTTG
TTTTCAAATTCAGGAGAATTATAACGATGCTTATCATATTCTTCTGATCC
AAGATCCAAAACCAATTGTATAATTTAAGCAAATATATATGTAATTAGAG
TGGATGGCCACTCTCAGGGGTATATTCCTCAACATATATCTTCAAAGTAG
ACTCTATATTAATTTTTAAAATGCTCTAGAGCTTGCAAAGTATTCTGGAA
TAGAAGACATAGCCAATTAAAAGACTAAAAGTTGCAGTATCCTTAATGCA
TTTCTTTAAGTTTTAATATAAATTAATTGGTAGTAATTCCTAGGAGAAAG
TTTTAATGCTATAATCCCGGTATGTTTTTATGAAGGAGCTTCTGTAAGAG
AAAAATCCCAGTCTCGGTCCTGGCTCACACAGTCGTTTTTTCTTTCCTCT
AGAGATTGCTGTTTGGAAGGAGAGAATGGGAGCACAGTCTAAGCGTCAAA
TCACATCTTTGTGAGGTGCTTGGCTTGCACACTACTCTGGCGATTTTATT
ATTATTATTATTATTATTATTATTATTATTATTATTACTACCATTATACT
TGGA

Query= MSMg01no486_i18.g1 MSMg01no486_i18.g1 CHROMAT_FILE:
MSMg01no486_i18.g1 PHD_FILE: MSMg01no486_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:53 2005
         (544 letters)



>mm_chr12_34524499_34525442
          Length = 944

 Score = 1052 bits (544), Expect = 0.0
 Identities = 544/544 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   catattagtaaggactagtagttcatgctcaacattgcaggagagagaattgcctaccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catattagtaaggactagtagttcatgctcaacattgcaggagagagaattgcctaccag 260

                                                                       
Query: 61  ctgtggaccccaatcatgacttgtattttgatttccctctgcttgagtatgtttctctat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtggaccccaatcatgacttgtattttgatttccctctgcttgagtatgtttctctat 320

                                                                       
Query: 121 cacttgttttcaaattcaggagaattataacgatgcttatcatattcttctgatccaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacttgttttcaaattcaggagaattataacgatgcttatcatattcttctgatccaaga 380

                                                                       
Query: 181 tccaaaaccaattgtataatttaagcaaatatatatgtaattagagtggatggccactct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaaaaccaattgtataatttaagcaaatatatatgtaattagagtggatggccactct 440

                                                                       
Query: 241 caggggtatattcctcaacatatatcttcaaagtagactctatattaatttttaaaatgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggggtatattcctcaacatatatcttcaaagtagactctatattaatttttaaaatgc 500

                                                                       
Query: 301 tctagagcttgcaaagtattctggaatagaagacatagccaattaaaagactaaaagttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctagagcttgcaaagtattctggaatagaagacatagccaattaaaagactaaaagttg 560

                                                                       
Query: 361 cagtatccttaatgcatttctttaagttttaatataaattaattggtagtaattcctagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtatccttaatgcatttctttaagttttaatataaattaattggtagtaattcctagg 620

                                                                       
Query: 421 agaaagttttaatgctataatcccggtatgtttttatgaaggagcttctgtaagagaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaagttttaatgctataatcccggtatgtttttatgaaggagcttctgtaagagaaaa 680

                                                                       
Query: 481 atcccagtctcggtcctggctcacacagtcgttttttctttcctctagagattgctgttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcccagtctcggtcctggctcacacagtcgttttttctttcctctagagattgctgttt 740

               
Query: 541 ggaa 544
           ||||
Sbjct: 741 ggaa 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)