Query= MSMg01no486_m06.b1 MSMg01no486_m06.b1 CHROMAT_FILE:
MSMg01no486_m06.b1 PHD_FILE: MSMg01no486_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:09 2005
(592 letters)
>mm_chr12_78199935_78200926
Length = 992
Score = 1089 bits (563), Expect = 0.0
Identities = 581/587 (98%)
Strand = Plus / Plus
Query: 6 gaattccacaatttttccaacttaaaattcctgatactggctagagcccaggcagcacat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccacaatttttccaacttaaaattcctgatactggctagagcccaggcagcacat 265
Query: 66 cacttgtctagccagtatgaggtccttgcttggatttccagcactgcaatatgcttcctg 125
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 266 cacttgtctagccagtatgaggtccttgcttggattgccagcactgcaataagcttcctg 325
Query: 126 acacttaacaatctagattcacagggcagctttctgtaaggacttcctgtgtcatagaac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acacttaacaatctagattcacagggcagctttctgtaaggacttcctgtgtcatagaac 385
Query: 186 ttgggcccacactttagcttatgcataaagtaagccaaatcttttagaatctccagatac 245
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 386 ttgggcccacactttagcttatgcatgaagtaagccaaatcttttagaatctccagatac 445
Query: 246 cctttaagttttgttttattttatttattttatttgtttatttattcttgagatagagtc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cctttaagttttgttttattttatttattttatttgtttatttattcttgagatagagtc 505
Query: 306 tgactatgtagccatggctgtcctggaactcaccatgtagaccaggatgaagtgaatggg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgactatgtagccatggctgtcctggaactcaccatgtagaccaggatgaagtgaatggg 565
Query: 366 tctactcactatgttgaccctaatcctaaccctaaccttgaactcatagtgatcagcctg 425
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tctacccactatgttgaccctaatcctaaccctaaccttgaactcatagtgatcagcctg 625
Query: 426 cttctgccttcgaagtgctgggatcaaaggtctgagccaccactgcctggtccatacttt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cttctgccttcgaagtgctgggatcaaaggtctgagccaccactgcctggtccatacttt 685
Query: 486 ttcctcactgttttattaagcccctcactgctctgagaggcccgatgaaggctgagttat 545
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 686 ttcctcaccgttttattaagcccctcactgctctgagaggcctgatgaaggctgagttat 745
Query: 546 gacttatttgctcacctggtgtttggttaagcaccaaagatgactaa 592
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gacttatttgctcacctggtgtttggttaagcaccaaagatgactaa 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_m06.g1 MSMg01no486_m06.g1 CHROMAT_FILE:
MSMg01no486_m06.g1 PHD_FILE: MSMg01no486_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:09 2005
(626 letters)
>mm_chr12_78352484_78353509
Length = 1026
Score = 1081 bits (559), Expect = 0.0
Identities = 588/613 (95%), Gaps = 24/613 (3%)
Strand = Plus / Minus
Query: 1 tgagccagcctagtctacaaagcaaactccaggagagcaggggtatagagtaaaactcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgagccagcctagtctacaaagcaaactccaggagagcaggggtatagagtaaaactcca 530
Query: 61 atctcaaataaataaataaataaataaataaataaataaataaataaatagccataaggt 120
||||| |||||||||||||||||||||||||||||||
Sbjct: 529 atctc------------------------aaataaataaataaataaatagccataaggt 494
Query: 121 aaaaagggaacacccctcggtcaggcaactaggatggctttaacctctttactcaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaaaagggaacacccctcggtcaggcaactaggatggctttaacctctttactcaaaaaa 434
Query: 181 ctaaataggtaactggatcaatcttcagtatctaaaagcagtgtactagaatcagatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctaaataggtaactggatcaatcttcagtatctaaaagcagtgtactagaatcagatatt 374
Query: 241 ttgaaaaatctgaggggttgttttgttttggggttttacttttttgttgtgttttggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttgaaaaatctgaggggttgttttgttttggggttttacttttttgttgtgttttggttt 314
Query: 301 ttgttttgcttttttgtttgttagcaaggtctcactactaggtagccctggttggcctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttgttttgcttttttgtttgttagcaaggtctcactactaggtagccctggttggcctga 254
Query: 361 aactcactatatagactaagctggctcaaattcagggatctagctgttcctgcctctgtt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 253 aactcactatatagactaagctggctcaaattcagggatctagctgttcctgcctctgct 194
Query: 421 tcccaaaacctgggattaaaggcctgcaacactatgacaagctactaaaaacggtttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcccaaaacctgggattaaaggcctgcaacactatgacaagctactaaaaacggtttgaa 134
Query: 481 acaaccttataaaaagtgggaaagagctgctaaccagtgttagtattttacaatatcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 acaaccttataaaaagtgggaaagagctgctaaccagtgttagtattttacaatatcttt 74
Query: 541 cttcttcacttagtaactgagtctaggtcagcacattgttgcctaggctgacctcaaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cttcttcacttagtaactgagtctaggtcagcacattgttgcctaggctgacctcaaatt 14
Query: 601 catgatcctcctg 613
|||||||||||||
Sbjct: 13 catgatcctcctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
