Query= MSMg01no488_b09.b1 MSMg01no488_b09.b1 CHROMAT_FILE:
MSMg01no488_b09.b1 PHD_FILE: MSMg01no488_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:53 2005
(654 letters)
>mm_chr12_80645201_80646251
Length = 1051
Score = 1187 bits (614), Expect = 0.0
Identities = 640/650 (98%), Gaps = 3/650 (0%)
Strand = Plus / Minus
Query: 5 gaattccagttttccctgatgttgtacatctcagtttactttccaaagactttaaagagt 64
||||||||||| | |||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 851 gaattccagttctacctgctgttgtacatctcagttcactttccaaagcctttaaagagt 792
Query: 65 atacttggtgtgtcttctaagactcatgcctgataaagtaagcctccaccttacctcctg 124
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 791 atacttggtgtgtcttctaagattcatgcctgat---gtaagcctccaccttacctcctg 735
Query: 125 ggggttttcaggattagatagattagaaaatctgcccacattccgagtccagacaacaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggggttttcaggattagatagattagaaaatctgcccacattccgagtccagacaacaga 675
Query: 185 atagtggatctgcatggaagccaggcacagtgggaggatcagcccacagcctcagaaccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atagtggatctgcatggaagccaggcacagtgggaggatcagcccacagcctcagaaccc 615
Query: 245 tggcaattcactaacaaaggaataaacaagctttgctgttactgaccacggtagaagagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tggcaattcactaacaaaggaataaacaagctttgctgttactgaccacggtagaagagc 555
Query: 305 tagaggagaaactggcaacatctcaacaacagatattacaaatcccattattactcatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tagaggagaaactggcaacatctcaacaacagatattacaaatcccattattactcatct 495
Query: 365 agaaagagaatatctgaaaagtcctacaaccactcacttggacacctgggttctataaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agaaagagaatatctgaaaagtcctacaaccactcacttggacacctgggttctataaat 435
Query: 425 gagaaagtataggccctgaggggttcattctggagaattcacataaacagaggtaataga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gagaaagtataggccctgaggggttcattctggagaattcacataaacagaggtaataga 375
Query: 485 cagggctgaacccaggtcaaattaagcacatatttccttctaatcttctgaacttagtag 544
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 374 cagggctgaacccaggtcaaattaagcacatatttccttctagtcttctgaacttagtag 315
Query: 545 tcatttggtgattctgagtatgtgttaagtttgccacctaaaatgtaagtggacagcatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcatttggtgattctgagtatgtgttaagtttgccacctaaaatgtaagtggacagcatc 255
Query: 605 attctagaatttgaatttggtagggaattacagaagaacctaaactactg 654
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 attctagaatttgaatttggtagggaattacagaagaacctaaactactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1051
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1041
Effective search space: 670404
Effective search space used: 670404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b09.g1 MSMg01no488_b09.g1 CHROMAT_FILE:
MSMg01no488_b09.g1 PHD_FILE: MSMg01no488_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:53 2005
(355 letters)
>mm_chr12_80456718_80457478
Length = 761
Score = 663 bits (343), Expect = 0.0
Identities = 354/361 (98%), Gaps = 6/361 (1%)
Strand = Plus / Plus
Query: 1 tacaactttaaagaaatgaataattggagaggaagggtcacagttgtgttgtagtttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacaactttaaagaaatgaataattggagaggaagggtcacagttgtgttgtagtttggg 260
Query: 61 acccagcagagtccgaggaggt------gattgggtgaactgctcatctgggagctgttt 114
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 acccagcagagtccgaggaggtttgagtgattgggtgaactgctcatctgggagctgttt 320
Query: 115 cttttggctgccttttgtgcctctccttggggacagccctcctttactcttataatgtat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttggctgccttttgtgcctctccttggggacagccctcctttactcttataatgtat 380
Query: 175 tttgcaactttcagttagaaaatagccatcaaaaatgaaccgttagtaaataaacacatt 234
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgcaactttcagtgagaaaatagccatcaaaaatgaaccgttagtaaataaacacatt 440
Query: 235 ctggttctatgatgggaatcactaagtagtggctggcttagtttgaagagaaaagttcat 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggttctatgatgggaatcactaagtagtggctggcttagtttgaagagaaaagttcat 500
Query: 295 ggtagtaactccgagaggtgacaccaggatcatgcttgtttggcgtgttaatgagtccaa 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtagtaactccgagaggtgacaccaggatcatgcttgtttggcgtgttaatgagtccaa 560
Query: 355 g 355
|
Sbjct: 561 g 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 761
Length adjustment: 9
Effective length of query: 346
Effective length of database: 752
Effective search space: 260192
Effective search space used: 260192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
