Query= MSMg01no488_c22.b1 MSMg01no488_c22.b1 CHROMAT_FILE:
MSMg01no488_c22.b1 PHD_FILE: MSMg01no488_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:01 2005
(647 letters)
>mm_chr12_106554563_106555611
Length = 1049
Score = 1131 bits (585), Expect = 0.0
Identities = 630/645 (97%), Gaps = 3/645 (0%)
Strand = Plus / Minus
Query: 5 gaattcgggcattgagacctcaaagcccacccccacagtgacacacttcctccaaggcca 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1016 gaattcgggcattgagacctcaaagcccacccccacagtgacacacttcctccaagacca 957
Query: 65 cacctactccaacaaggccacacctcctaatactgccactccctggggggccacgcattc 124
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 956 cacctactccaacgaggccacacctcctaatactgccactccc-cgggggccacgcattc 898
Query: 125 aaacacatgaatgagtccatgggagccaaacttattcaaactaccacacaattctataat 184
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 897 aaacacatgaatgagtccacaggagccaaacttattcaaactaccacacaattctataat 838
Query: 185 tgaggttccaccttccctggtaattcaagttttcgacaactgaacaaaaactttccaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tgaggttccaccttccctggtaattcaagttttcgacaactgaacaaaaactttccaaca 778
Query: 245 cataaggacaagcctttcacttcaatgtcgtatttccggggcagtgtttaagggagtgtt 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cataaggacaagactttcacttcaatgtcgtatttccggggcagtgtttaagggagtgtt 718
Query: 305 ttacatgcaagtgtctgggagcagctgtaactggatcccacagcagagatggttgggaat 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 717 ttacatgcaagtgtctgggagcagctgtaactggatcccacagcagggatggttgggaat 658
Query: 365 ggggggggggc-tcttctgtttctgcactgcatgtttattgcacatctgcctttgcttgg 423
|| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggtgggggtgcctcttctgtttctgcactgcatgtttattgcacatctgcctttgcttgg 598
Query: 424 gacaaatgctgagcccttgaggcagaggacgggcctcacccctaacagcaacaacacatt 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gacagatgctgagcccttgaggcagaggacgggcctcacccctaacagcaacaacacatt 538
Query: 484 aaaggtgcttcgggagaagagatggggatgtgtctgtgacggggtggactggatagattt 543
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 537 ataggtgcttcgggagaagagatggggatgtgtctgtgacggggtggactggatagtttt 478
Query: 544 tggaactgagttatctctatattgaatctaggagcctacagcttttatctttcttcttat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tggaactgagttatctctatattgaatctaggagcctacagcttttatctttcttcttat 418
Query: 604 tttttttt-gttacatttactgttaattactggccaaagggaaac 647
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 417 tttttttttgttacatttactgttaattactggccaaagggaaac 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1049
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1039
Effective search space: 661843
Effective search space used: 661843
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_c22.g1 MSMg01no488_c22.g1 CHROMAT_FILE:
MSMg01no488_c22.g1 PHD_FILE: MSMg01no488_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:01 2005
(605 letters)
>mm_chr12_106531658_106532662
Length = 1005
Score = 1116 bits (577), Expect = 0.0
Identities = 595/601 (99%)
Strand = Plus / Plus
Query: 1 ctctgtaaaggtaagagtgggcaagagaatgactctctgatctcaggaccttggcacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgtaaaggtaagagtgggcaagagaatgactctctgatctcaggaccttggcacgac 260
Query: 61 agggatcctgcagtgagggctggccagggcaggggtatggtccagcttcaccacatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggatcctgcagtgagggctggccagggcaggggtatggtccagcttcaccacatcaaa 320
Query: 121 ctacagttagagtctggttaccatagctaccagagagtctcaccatccagtttttgatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacagttagagtctggttaccatagctaccagagagtctcaccatccagtttttgatgg 380
Query: 181 catagttggacttggtgagaggtctttcatgttttgtatcttttttattcagggcctagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagttggacttggtgagaggtctttcatgttttgtatcttttttattcagggcctagt 440
Query: 241 ggcataggacctatcagcccagccacttggaaggctgagacagagggactgggagtccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcataggacctatcagcccagccacttggaaggctgagacagagggactgggagtccaa 500
Query: 301 ggccttccaggacttcagggctgagttcaaaaccttatcacaatatgagagtagaaagca 360
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 501 ggccttccaggacttcagggctgagttcaaaaccttatctcaaaatgagagtagaaagca 560
Query: 361 gggtgcaggtcccaggggcatgtctcaagtgtgtgagactccaggtttaatgcccaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtgcaggtcccaggggcatgtctcaagtgtgtgagactccaggtttaatgcccaacac 620
Query: 421 ggagggaagatgacctgacttatgtgtggggttcaatgtaataagttctgtgtgtttgtg 480
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggagggaagatggcctcacttatgtgtggggttcaatgtaataagttctgtgtgtttgtg 680
Query: 481 gagggcagacatgtgtttacacgcatgtggaagccagagatcaacatcctgtgtcattcc 540
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 gagggcagacatgtgtttactcgcatgtggaagccagagatcaacatcctgtgtcatttc 740
Query: 541 ttaggacctgcctactttgctctcatagacaaggccactccctgggatctggggcgcact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttaggacctgcctactttgctctcatagacaaggccactccctgggatctggggcgcact 800
Query: 601 a 601
|
Sbjct: 801 a 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
