Query= MSMg01no488_g05.b1 MSMg01no488_g05.b1 CHROMAT_FILE:
MSMg01no488_g05.b1 PHD_FILE: MSMg01no488_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:18 2005
(690 letters)
>mm_chr12_37229320_37230408
Length = 1089
Score = 1170 bits (605), Expect = 0.0
Identities = 665/685 (97%), Gaps = 2/685 (0%)
Strand = Plus / Plus
Query: 7 attcaactttctccaagtacaggaatacacacttgaataatacaaagacaacctttacac 66
|||||||| ||| || |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 207 attcaactctctgcaggtacagaaatacacacttgaataacacaaagacaacctttacac 266
Query: 67 agcacacaaaaccatcccccaacatgacccctgtgtagtttgtgacagattgacaatcac 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 267 agcacacaaaaccatcccccaacatgacccctgtgtagtttgtgacagattgacaaccac 326
Query: 127 tgctttttgggtgtttttcatggtcctcatcttcttttgagacatgttctaaaagccctg 186
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 327 tgctttt-gggtgtttttcatggtcctcatcttcctttgagacatgttctaaaagccctg 385
Query: 187 cttgttgcagtgtcccaaggtatggctcagatacagttggaggcctaatggccagcacat 246
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cttgttgcagtgccccaaggtatggctcagatacagttggaggcctaatggccagcacat 445
Query: 247 actagacactagtaaattgtgtttcttataagtatcagagatgaagatgaagggagaaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 actagacactagtaaattgtgtttcttataagtatcagagatgaagatgaagggagaaaa 505
Query: 307 gaaagacaattgtgaccatacatgagctaatcatggtgctaagaaaactgacgtatttgt 366
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaaagacaattgtgaccatagatgagctaatcatggtgctaagaaaactgacgtatttgt 565
Query: 367 atcaattatgaactgaccagcttcctagttaaacttctattattaatgctgggaaaatgg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 566 atcaattatgaactgaccagcttcctagttaaacttctattattaatgctgggaaaacgg 625
Query: 427 aagaagccatgggatagataccagaacggtttatatctttcatcactgcagacttctata 486
||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 626 aagaagccatggggtagataccagaacggtttatatcttccatcactgcagacttctatt 685
Query: 487 accattttgatgacagctttatgttttgaaatgtttttgtttgcctaattgattttatta 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 accattttgatgacagctttatgttttgaaatgtttttgtttgcctaattgattttatta 745
Query: 547 cagtttaattcattttgtgttttcttttttgccttttccc-ccattcattaatgtattta 605
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 746 cagtttaattcattttgtgttttcttttttgccttttttcgccattcattaatgtattta 805
Query: 606 tccactttgcagcctgattacagaacccctcccagtctgacccttacagatccctcccct 665
| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 806 ttcactttgcagcctgattacagaccccctcccagtctgacccttacagatccctctcct 865
Query: 666 gattatgccttgcccttcttctcag 690
|||||||||||||||||||||||||
Sbjct: 866 gattatgccttgcccttcttctcag 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1089
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1079
Effective search space: 733720
Effective search space used: 733720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_g05.g1 MSMg01no488_g05.g1 CHROMAT_FILE:
MSMg01no488_g05.g1 PHD_FILE: MSMg01no488_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:18 2005
(667 letters)
>mm_chr12_37340622_37341688
Length = 1067
Score = 572 bits (296), Expect = e-167
Identities = 343/366 (93%), Gaps = 15/366 (4%)
Strand = Plus / Minus
Query: 1 attctctatccct--g-----atggacagcaatatcactttgcaatatgggaggcctgaa 53
||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attctctatcccttagtcaatatggacagcaatatcactttgcaatatgggaggcctgaa 303
Query: 54 taagtctgtgtttatgcagattacagctgagagctgtcacttatgaaatggtgtgaaata 113
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 taagtctgtgtttatgcagattacagctgagagctatcacttatgaaatggtgtgaaata 243
Query: 114 tatgcatcattactcctcggctaatccctgtcttagttagagttactattgctgtgatga 173
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 242 tatgcatcattactccttggctaatccctgtcttagttagagttactattgctatgatga 183
Query: 174 gacactatgaccaaagtaaacgggaggacagcgtttgtttagcgcacacttccacattgc 233
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 182 gacactgtgaccaaagtaaacgggaggacagggtttgtttagcgcacacttccacattgc 123
Query: 234 agtccatcatttttt----gaagtcaggacaggagctcaaacagggcagaaacctggagg 289
||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agtccatca----ctgaaggaagtcaggacaggagctcaaacagggcagaaacctggagg 67
Query: 290 aaggactgatgcagaggccacagtggggtgctgcttactggtttgctcatcatggcttgc 349
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 66 aaggactgatgcagaggccacagtggggtgctgcttgctggtttgttcatcatggcttgc 7
Query: 350 tcagcc 355
||||||
Sbjct: 6 tcagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
